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Gene: C2cd4b (C2 calcium-dependent domain containing 4B) Rattus norvegicus
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Symbol: C2cd4b
Name: C2 calcium-dependent domain containing 4B
Description: Predicted to be involved in positive regulation of acute inflammatory response; regulation of cell adhesion; and regulation of vascular permeability involved in acute inflammatory response. Orthologous to human C2CD4B (C2 calcium dependent domain containing 4B); INTERACTS WITH 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: MODEL
Also known as: C2 calcium-dependent domain-containing protein 4B; Fam148b; family with sequence similarity 148, member B; LOC501015; Nlf2; nuclear localized factor 2; similar to nuclear localized factor 2
Orthologs:
Homo sapiens (human) : C2CD4B (C2 calcium dependent domain containing 4B)  HGNC  Alliance
Mus musculus (house mouse) : C2cd4b (C2 calcium-dependent domain containing 4B)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : C2CD4B (C2 calcium dependent domain containing 4B)
Canis lupus familiaris (dog) : C2CD4B (C2 calcium dependent domain containing 4B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : C2cd4b (C2 calcium dependent domain containing 4B)
Sus scrofa (pig) : C2CD4B (C2 calcium dependent domain containing 4B)
Chlorocebus sabaeus (African green monkey) : C2CD4B (C2 calcium dependent domain containing 4B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0873,589,848 - 73,594,516 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl873,593,310 - 73,594,332 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0877,922,752 - 77,924,242 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4872,110,481 - 72,111,976 (+)NCBIRGSC3.4rn4RGSC3.4
Celera873,311,493 - 73,316,162 (-)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on C2cd4b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1591932
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.