Gene: Ccdc40 (coiled-coil domain containing 40) Rattus norvegicus
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Symbol: Ccdc40
Name: coiled-coil domain containing 40
Description: Predicted to be involved in several processes, including animal organ development, cilium assembly, and determination of left/right symmetry; predicted to localize to the axoneme and motile cilium; orthologous to human CCDC40 (coiled-coil domain containing 40); INTERACTS WITH bisphenol A; glycidol; ozone.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: coiled-coil domain-containing protein 40; LOC287867; similar to myosin, heavy polypeptide 9, non-muscle
Orthologs:
Homo sapiens (human) : CCDC40 (coiled-coil domain containing 40)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc40 (coiled-coil domain containing 40)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc40 (coiled-coil domain containing 40)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC40 (coiled-coil domain containing 40)
Canis lupus familiaris (dog) : CCDC40 (coiled-coil domain containing 40)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc40 (coiled-coil domain containing 40)
Sus scrofa (pig) : CCDC40 (coiled-coil domain containing 40)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010108,055,270 - 108,393,408 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010107,952,498 - 108,005,242 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera10103,034,282 - 103,075,071 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc40
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1592118
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.