Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Kdm7a (lysine demethylase 7A) Rattus norvegicus
Analyze
Symbol: Kdm7a
Name: lysine demethylase 7A
Description: Predicted to have histone demethylase activity; methylated histone binding activity; and transition metal ion binding activity. Predicted to be involved in histone lysine demethylation and positive regulation of transcription, DNA-templated. Predicted to localize to the nucleolus and nucleoplasm. Human ortholog(s) of this gene implicated in melanoma. Orthologous to human KDM7A (lysine demethylase 7A); PARTICIPATES IN histone modification pathway; INTERACTS WITH bisphenol A; valproic acid; (S)-nicotine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: Jhdm1d; jumonji C domain containing histone demethylase 1; LOC684297; lysine (K)-specific demethylase 7A; lysine-specific demethylase 7A; similar to PHD finger protein 8
Orthologs:
Homo sapiens (human) : KDM7A (lysine demethylase 7A)  HGNC  Alliance
Mus musculus (house mouse) : Kdm7a (lysine (K)-specific demethylase 7A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Kdm7a (lysine demethylase 7A)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM7A (lysine demethylase 7A)
Canis lupus familiaris (dog) : KDM7A (lysine demethylase 7A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm7a (lysine demethylase 7A)
Sus scrofa (pig) : KDM7A (lysine demethylase 7A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0466,915,603 - 66,957,971 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0466,720,232 - 66,786,800 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera462,912,406 - 62,952,948 (-)NCBICelera
Cytogenetic Map4q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Kdm7a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1592650
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.