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Gene: Taf12 (TATA-box binding protein associated factor 12) Rattus norvegicus
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Symbol: Taf12
Name: TATA-box binding protein associated factor 12
Description: Predicted to contribute to DNA-binding transcription factor activity and histone acetyltransferase activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly; histone H3 acetylation; and positive regulation of DNA-binding transcription factor activity. Predicted to localize to the SAGA-type complex and transcription factor TFIID complex. Orthologous to human TAF12 (TATA-box binding protein associated factor 12); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription initiation pathway; INTERACTS WITH bisphenol A; C60 fullerene; p-toluidine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC682902; similar to Transcription initiation factor TFIID subunit 12 (Transcription initiation factor TFIID 20 kDa subunits) (TAFII-20) (TAFII20); TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor; transcription initiation factor TFIID subunit 12
Orthologs:
Homo sapiens (human) : TAF12 (TATA-box binding protein associated factor 12)  HGNC  Alliance
Mus musculus (house mouse) : Taf12 (TATA-box binding protein associated factor 12)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : TAF12 (TATA-box binding protein associated factor 12)
Canis lupus familiaris (dog) : TAF12 (TATA-box binding protein associated factor 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Taf12 (TATA-box binding protein associated factor 12)
Sus scrofa (pig) : TAF12 (TATA-box binding protein associated factor 12)
Chlorocebus sabaeus (African green monkey) : TAF12 (TATA-box binding protein associated factor 12)
Heterocephalus glaber (naked mole-rat) : Taf12 (TATA-box binding protein associated factor 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05150,459,701 - 150,476,521 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5150,459,713 - 150,475,186 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05154,126,851 - 154,143,964 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera5142,905,400 - 142,920,328 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Taf12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1592841
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.