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Gene: Oc90 (otoconin 90) Rattus norvegicus
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Symbol: Oc90
Name: otoconin 90
Description: Predicted to have several functions, including calcium ion binding activity; calcium-dependent phospholipase A2 activity; and phospholipid binding activity. Predicted to be involved in otolith mineralization and phospholipid metabolic process. Predicted to localize to the extracellular matrix. Orthologous to human OC90 (otoconin 90); INTERACTS WITH 2,2',5,5'-tetrachlorobiphenyl; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC690625; otoconin-90; similar to Otoconin 90 precursor (Oc90) (Otoconin-95) (Oc95)
Orthologs:
Homo sapiens (human) : OC90 (otoconin 90)  HGNC  Alliance
Mus musculus (house mouse) : Oc90 (otoconin 90)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Oc90 (otoconin 90)
Pan paniscus (bonobo/pygmy chimpanzee) : OC90 (otoconin 90)
Canis lupus familiaris (dog) : OC90 (otoconin 90)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Oc90 (otoconin 90)
Sus scrofa (pig) : OC90 (otoconin 90)
Chlorocebus sabaeus (African green monkey) : OC90 (otoconin 90)
Heterocephalus glaber (naked mole-rat) : Oc90 (otoconin 90)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07106,615,859 - 106,697,089 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7106,619,326 - 106,653,567 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07106,389,398 - 106,417,375 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47103,230,625 - 103,264,151 (-)NCBIRGSC3.4rn4RGSC3.4
Celera794,190,792 - 94,224,290 (-)NCBICelera
Cytogenetic Map7q33-q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Oc90
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1593441
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.