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Gene: Traf5 (TNF receptor-associated factor 5) Rattus norvegicus
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Symbol: Traf5
Name: TNF receptor-associated factor 5
Description: Predicted to have several functions, including enzyme binding activity; tumor necrosis factor receptor binding activity; and ubiquitin-protein transferase activity. Predicted to be involved in several processes, including positive regulation of NF-kappaB transcription factor activity; positive regulation of intracellular signal transduction; and protein K63-linked ubiquitination. Predicted to localize to several cellular components, including CD40 receptor complex; centrosome; and cytoplasmic side of plasma membrane. Orthologous to human TRAF5 (TNF receptor associated factor 5); INTERACTS WITH amphetamine; furosemide; oxaliplatin.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC684173; LOW QUALITY PROTEIN: TNF receptor-associated factor 5; similar to TNF receptor-associated factor 5
Orthologs:
Homo sapiens (human) : TRAF5 (TNF receptor associated factor 5)  HGNC  Alliance
Mus musculus (house mouse) : Traf5 (TNF receptor-associated factor 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Traf5 (TNF receptor associated factor 5)
Pan paniscus (bonobo/pygmy chimpanzee) : TRAF5 (TNF receptor associated factor 5)
Canis lupus familiaris (dog) : TRAF5 (TNF receptor associated factor 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Traf5 (TNF receptor associated factor 5)
Sus scrofa (pig) : TRAF5 (TNF receptor associated factor 5)
Chlorocebus sabaeus (African green monkey) : TRAF5 (TNF receptor associated factor 5)
Heterocephalus glaber (naked mole-rat) : Traf5 (TNF receptor associated factor 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.013110,758,556 - 110,801,871 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13110,758,761 - 110,784,209 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013115,317,216 - 115,360,873 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera13103,011,066 - 103,057,720 (-)NCBICelera
Cytogenetic Map13q27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Traf5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1593883
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.