Gene: Trim25 (tripartite motif-containing 25) Rattus norvegicus
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Symbol: Trim25
Name: tripartite motif-containing 25
Description: Predicted to have ubiquitin protein ligase activity; involved in response to estrogen and response to vitamin D; predicted to localize to the cytosol and nuclear body; orthologous to human TRIM25 (tripartite motif containing 25); PARTICIPATES IN influenza A pathway; Retinoic acid-inducible gene (RIG) I-like receptor signaling pathway; INTERACTS WITH (RS)-amphetamine; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin/ISG15 ligase TRIM25; Efp; Estrogen-responsive finger protein; MGC72607; Trim25_mapped; tripartite motif protein 25; tripartite motif protein 25 (mapped); Zinc finger protein 147; Znf147
Orthologs:
Homo sapiens (human) : TRIM25 (tripartite motif containing 25)  HGNC  Alliance
Mus musculus (house mouse) : Trim25 (tripartite motif-containing 25)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim25 (tripartite motif containing 25)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM25 (tripartite motif containing 25)
Canis lupus familiaris (dog) : TRIM25 (tripartite motif containing 25)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim25 (tripartite motif containing 25)
Sus scrofa (pig) : TRIM25 (tripartite motif containing 25)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01076,343,847 - 76,362,159 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01073,750,003 - 73,769,423 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41077,459,844 - 77,488,383 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1072,717,934 - 72,735,695 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Trim25
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1594396
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.