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Gene: Pygo1 (pygopus family PHD finger 1) Rattus norvegicus
Symbol: Pygo1
Name: pygopus family PHD finger 1
Description: Predicted to have methylated histone binding activity. Predicted to be involved in several processes, including animal organ development; protein localization to nucleus; and spermatid nucleus differentiation. Predicted to localize to the nucleus. Orthologous to human PYGO1 (pygopus family PHD finger 1); INTERACTS WITH 17alpha-ethynylestradiol; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: LOC691857; pygopus 1; pygopus homolog 1; similar to Pygopus homolog 1
Homo sapiens (human) : PYGO1 (pygopus family PHD finger 1)  HGNC  Alliance
Mus musculus (house mouse) : Pygo1 (pygopus 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pygo1 (pygopus family PHD finger 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PYGO1 (pygopus family PHD finger 1)
Canis lupus familiaris (dog) : PYGO1 (pygopus family PHD finger 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pygo1 (pygopus family PHD finger 1)
Sus scrofa (pig) : PYGO1 (pygopus family PHD finger 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0879,607,013 - 79,625,188 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0873,464,585 - 73,482,239 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4877,660,208 - 77,820,894 (+)NCBIRGSC3.4rn4RGSC3.4
Celera868,069,742 - 68,086,746 (-)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)

References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
More on Pygo1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1594620
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.