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Gene: Pou2af1 (POU class 2 homeobox associating factor 1) Rattus norvegicus
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Symbol: Pou2af1
Name: POU class 2 homeobox associating factor 1
CRRD ID: 1594728
Description: Predicted to have RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; RNA polymerase II core promoter sequence-specific DNA binding activity; and transcription coactivator activity. Predicted to be involved in cellular response to virus; germinal center B cell differentiation; and positive regulation of gene expression. Predicted to localize to RNA polymerase II transcription regulator complex. Orthologous to human POU2AF1 (POU class 2 homeobox associating factor 1); INTERACTS WITH 1-naphthyl isothiocyanate; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC300703; LOC690528; POU class 2 associating factor 1; POU domain class 2-associating factor 1; POU domain, class 2, associating factor 1; similar to POU domain class 2, associating factor 1 (B-cell-specific coactivator OBF-1) (OCT binding factor 1) (BOB-1) (BOB1) (OCA-B)
Orthologs:
Homo sapiens (human) : POU2AF1 (POU class 2 homeobox associating factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Pou2af1 (POU domain, class 2, associating factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pou2af1 (POU class 2 homeobox associating factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : POU2AF1 (POU class 2 homeobox associating factor 1)
Canis lupus familiaris (dog) : POU2AF1 (POU class 2 homeobox associating factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pou2af1 (POU class 2 homeobox associating factor 1)
Sus scrofa (pig) : POU2AF1 (POU class 2 homeobox associating factor 1)
Chlorocebus sabaeus (African green monkey) : POU2AF1 (POU class 2 homeobox associating factor 1)
Heterocephalus glaber (naked mole-rat) : Pou2af1 (POU class 2 homeobox associating factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0855,603,968 - 55,631,448 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl855,603,968 - 55,631,446 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0854,198,726 - 54,226,204 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4854,534,417 - 54,561,348 (+)NCBIRGSC3.4rn4RGSC3.4
Celera851,067,218 - 51,094,286 (+)NCBICelera
Cytogenetic Map8q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pou2af1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1594728
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.