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Gene: Cldn20 (claudin 20) Rattus norvegicus
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Symbol: Cldn20
Name: claudin 20
Description: Predicted to have structural molecule activity. Predicted to localize to the bicellular tight junction; integral component of membrane; and plasma membrane. Orthologous to human CLDN20 (claudin 20); PARTICIPATES IN hepatitis C pathway; INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); butanal (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: claudin-20; LOC680178; similar to claudin 20
Orthologs:
Homo sapiens (human) : CLDN20 (claudin 20)  HGNC  Alliance
Mus musculus (house mouse) : Cldn20 (claudin 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cldn20 (claudin 20)
Pan paniscus (bonobo/pygmy chimpanzee) : CLDN20 (claudin 20)
Canis lupus familiaris (dog) : CLDN20 (claudin 20)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cldn20 (claudin 20)
Sus scrofa (pig) : CLDN20 (claudin 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0144,443,218 - 44,447,595 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0145,773,397 - 45,777,686 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4138,528,300 - 38,528,959 (+)NCBIRGSC3.4rn4RGSC3.4
Celera139,767,484 - 39,768,143 (+)NCBICelera
Cytogenetic Map1q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cldn20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1595446
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.