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Gene: Rorc (RAR-related orphan receptor C) Rattus norvegicus
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Symbol: Rorc
Name: RAR-related orphan receptor C
Description: Predicted to have several functions, including DNA-binding transcription factor activity; oxysterol binding activity; and transcription coactivator binding activity. Involved in circadian rhythm. Predicted to localize to the external side of plasma membrane and nuclear body. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Orthologous to human RORC (RAR related orphan receptor C); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC368158; MGC189525; nuclear receptor ROR-gamma; RAR-related orphan receptor gamma; similar to Nuclear receptor ROR-gamma (Nuclear receptor RZR-gamma) (Thymus orphan receptor) (TOR)
Orthologs:
Homo sapiens (human) : RORC (RAR related orphan receptor C)  HGNC  Alliance
Mus musculus (house mouse) : Rorc (RAR-related orphan receptor gamma)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rorc (RAR related orphan receptor C)
Pan paniscus (bonobo/pygmy chimpanzee) : RORC (RAR related orphan receptor C)
Canis lupus familiaris (dog) : RORC (RAR related orphan receptor C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rorc (RAR related orphan receptor C)
Sus scrofa (pig) : RORC (RAR related orphan receptor C)
more info ...
Allele / Splice: Rorcem3Mcwi   Rorcem5Mcwi  
Genetic Models: LEW-Rorcem3Mcwi LEW-Rorcem5Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02195,612,471 - 195,636,797 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
RGSC_v3.42189,345,134 - 189,369,442 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2174,560,165 - 174,584,474 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rorc
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1595785
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.