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Gene: Taf1b (TATA-box binding protein associated factor, RNA polymerase I subunit B) Rattus norvegicus
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Symbol: Taf1b
Name: TATA-box binding protein associated factor, RNA polymerase I subunit B
Description: Predicted to have RNA polymerase I CORE element sequence-specific DNA binding activity. Predicted to be involved in RNA polymerase I preinitiation complex assembly and nucleolar large rRNA transcription by RNA polymerase I. Predicted to localize to the RNA polymerase I core factor complex and RNA polymerase transcription factor SL1 complex. Orthologous to human TAF1B (TATA-box binding protein associated factor, RNA polymerase I subunit B); PARTICIPATES IN RNA polymerase I transcription pathway; INTERACTS WITH bisphenol A; (-)-epigallocatechin 3-gallate (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC690450; RNA polymerase I-specific TBP-associated factor 63 kDa; similar to TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B; TAFI63; TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B; TATA box-binding protein-associated factor 1B; TATA box-binding protein-associated factor RNA polymerase I subunit B; TBP-associated factor 1B; transcription initiation factor SL1/TIF-IB subunit B
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0643,644,931 - 43,722,124 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0660,512,955 - 60,590,183 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4642,127,301 - 42,204,465 (+)NCBIRGSC3.4rn4RGSC3.4
Celera640,405,142 - 40,482,218 (+)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Taf1b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1596058
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.