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Gene: Ncbp2 (nuclear cap binding protein subunit 2) Rattus norvegicus
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Symbol: Ncbp2
Name: nuclear cap binding protein subunit 2
Description: Exhibits RNA 7-methylguanosine cap binding activity. Predicted to be involved in several processes, including mRNA metabolic process; regulation of gene expression; and snRNA export from nucleus. Localizes to nuclear cap binding activity complex and nucleus. Orthologous to human NCBP2 (nuclear cap binding protein subunit 2); PARTICIPATES IN 5'-end pre-mRNA capping pathway; RNA polymerase II transcription elongation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; gentamycin; 1,2-dimethylhydrazine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 20 kDa nuclear cap-binding protein; CBP20; LOC100911481; LOC689116; NCBP 20 kDa subunit; nuclear cap-binding protein subunit 2; nuclear cap-binding protein subunit 2-like; phosphatidylinositol glycan anchor biosynthesis, class Z; Pigz; similar to nuclear cap binding protein subunit 2
Orthologs:
Homo sapiens (human) : NCBP2 (nuclear cap binding protein subunit 2)  HGNC  Alliance
Mus musculus (house mouse) : Ncbp2 (nuclear cap binding protein subunit 2)  MGI  Alliance
Sus scrofa (pig) : NCBP2 (nuclear cap binding protein subunit 2)
Chlorocebus sabaeus (African green monkey) : NCBP2 (nuclear cap binding protein subunit 2)
Heterocephalus glaber (naked mole-rat) : Ncbp2 (nuclear cap binding protein subunit 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01172,071,838 - 72,103,087 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1172,921,282 - 72,929,003 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01175,147,098 - 75,178,295 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41170,642,907 - 70,651,744 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1168,243,480 - 68,252,317 (-)NCBICelera
Cytogenetic Map11q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ncbp2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1596188
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.