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Gene: Rp1 (RP1, axonemal microtubule associated) Rattus norvegicus
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Symbol: Rp1
Name: RP1, axonemal microtubule associated
Description: Predicted to have microtubule binding activity. Predicted to be involved in several processes, including photoreceptor cell development; photoreceptor cell maintenance; and positive regulation of non-motile cilium assembly. Predicted to localize to several cellular components, including ciliary tip; cytoskeleton; and photoreceptor cell cilium. Human ortholog(s) of this gene implicated in retinitis pigmentosa 1. Orthologous to human RP1 (RP1 axonemal microtubule associated); PARTICIPATES IN retinitis pigmentosa pathway; INTERACTS WITH bisphenol A; endosulfan; phenformin.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: LOC681377; oxygen-regulated protein 1; rCG30348-like; retinitis pigmentosa 1; retinitis pigmentosa 1 (autosomal dominant); retinitis pigmentosa 1 (human); retinitis pigmentosa 1 homolog; retinitis pigmentosa 1 homolog (human); Rp1h; similar to Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
Orthologs:
Homo sapiens (human) : RP1 (RP1 axonemal microtubule associated)  HGNC  Alliance
Mus musculus (house mouse) : Rp1 (retinitis pigmentosa 1 (human))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rp1 (RP1 axonemal microtubule associated)
Pan paniscus (bonobo/pygmy chimpanzee) : RP1 (RP1 axonemal microtubule associated)
Canis lupus familiaris (dog) : RP1 (RP1 axonemal microtubule associated)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rp1 (RP1 axonemal microtubule associated)
Sus scrofa (pig) : RP1 (RP1 axonemal microtubule associated)
Chlorocebus sabaeus (African green monkey) : RP1 (RP1 axonemal microtubule associated)
Heterocephalus glaber (naked mole-rat) : Rp1 (RP1 axonemal microtubule associated)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0515,005,028 - 15,060,508 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl515,043,955 - 15,060,508 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0519,789,094 - 19,844,587 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4515,393,101 - 15,401,890 (+)NCBIRGSC3.4rn4RGSC3.4
Celera514,541,674 - 14,558,002 (+)NCBICelera
Cytogenetic Map5q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1596713
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-06-30
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.