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Gene: Pacs2 (phosphofurin acidic cluster sorting protein 2) Rattus norvegicus
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Symbol: Pacs2
Name: phosphofurin acidic cluster sorting protein 2
Description: Predicted to have ion channel binding activity. Predicted to be involved in protein localization to phagophore assembly site and protein localization to plasma membrane. Predicted to localize to the endoplasmic reticulum and mitochondrion. Human ortholog(s) of this gene implicated in early infantile epileptic encephalopathy 66. Orthologous to human PACS2 (phosphofurin acidic cluster sorting protein 2); INTERACTS WITH (RS)-amphetamine; endosulfan; valproic acid.
Type: protein-coding
RefSeq Status: MODEL
Also known as: hypothetical protein LOC691631; LOC691631
Orthologs:
Homo sapiens (human) : PACS2 (phosphofurin acidic cluster sorting protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Pacs2 (phosphofurin acidic cluster sorting protein 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pacs2 (phosphofurin acidic cluster sorting protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PACS2 (phosphofurin acidic cluster sorting protein 2)
Canis lupus familiaris (dog) : PACS2 (phosphofurin acidic cluster sorting protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pacs2 (phosphofurin acidic cluster sorting protein 2)
Sus scrofa (pig) : PACS2 (phosphofurin acidic cluster sorting protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06137,824,136 - 137,889,144 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06146,820,318 - 146,884,454 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46138,023,917 - 138,080,745 (+)NCBIRGSC3.4rn4RGSC3.4
Celera6129,635,451 - 129,694,749 (+)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pacs2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1597262
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.