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Gene: Tbpl1 (TATA-box binding protein like 1) Rattus norvegicus
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Symbol: Tbpl1
Name: TATA-box binding protein like 1
Description: Predicted to have DNA binding activity; DNA-binding transcription activator activity, RNA polymerase II-specific; and transcription factor binding activity. Predicted to be involved in nucleobase-containing compound biosynthetic process; positive regulation of transcription by RNA polymerase II; and spermatid development. Predicted to localize to the cytoplasm and nucleus. Orthologous to human TBPL1 (TATA-box binding protein like 1); PARTICIPATES IN Huntington's disease pathway; INTERACTS WITH (RS)-amphetamine; bisphenol A; PhIP.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC292173; LOC689030; similar to TATA box-binding protein-like protein 1 (TBP-like protein 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (21-kDa TBP-like protein); TATA box binding protein-like 1; TATA box-binding protein-like protein 1; TBP-like 1
Orthologs:
Homo sapiens (human) : TBPL1 (TATA-box binding protein like 1)  HGNC  Alliance
Mus musculus (house mouse) : Tbpl1 (TATA box binding protein-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tbpl1 (TATA-box binding protein like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TBPL1 (TATA-box binding protein like 1)
Canis lupus familiaris (dog) : TBPL1 (TATA-box binding protein like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tbpl1 (TATA-box binding protein like 1)
Sus scrofa (pig) : TBPL1 (TATA-box binding protein like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0123,977,154 - 24,002,512 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0125,441,466 - 25,466,751 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4123,295,515 - 23,320,298 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1123,298,484 - 23,322,895 (+)NCBI
Celera121,506,025 - 21,530,791 (+)NCBICelera
Cytogenetic Map1p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tbpl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1597456
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.