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Gene: Snrpd3 (small nuclear ribonucleoprotein D3 polypeptide) Rattus norvegicus
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Symbol: Snrpd3
Name: small nuclear ribonucleoprotein D3 polypeptide
Description: Exhibits U1 snRNP binding activity. Predicted to be involved in protein methylation and spliceosomal snRNP assembly. Localizes to the U1 snRNP. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human SNRPD3 (small nuclear ribonucleoprotein D3 polypeptide); PARTICIPATES IN spliceosome pathway; INTERACTS WITH bisphenol A; flutamide; nefazodone.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC687711; similar to small nuclear ribonucleoprotein D3; small nuclear ribonucleoprotein D3; small nuclear ribonucleoprotein Sm D3
Orthologs:
Homo sapiens (human) : SNRPD3 (small nuclear ribonucleoprotein D3 polypeptide)  HGNC  Alliance
Mus musculus (house mouse) : Snrpd3 (small nuclear ribonucleoprotein D3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snrpd3 (small nuclear ribonucleoprotein D3 polypeptide)
Pan paniscus (bonobo/pygmy chimpanzee) : SNRPD3 (small nuclear ribonucleoprotein D3 polypeptide)
Canis lupus familiaris (dog) : SNRPD3 (small nuclear ribonucleoprotein D3 polypeptide)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snrpd3 (small nuclear ribonucleoprotein D3 polypeptide)
Sus scrofa (pig) : SNRPD3 (small nuclear ribonucleoprotein D3 polypeptide)
Chlorocebus sabaeus (African green monkey) : SNRPD3 (small nuclear ribonucleoprotein D3 polypeptide)
Heterocephalus glaber (naked mole-rat) : Snrpd3 (small nuclear ribonucleoprotein D3 polypeptide)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02014,080,562 - 14,095,644 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2014,080,565 - 14,095,181 (-)Ensembl
Rnor_5.02016,265,897 - 16,280,500 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2014,615,859 - 14,631,320 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Snrpd3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1597573
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.