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Gene: Smarcc2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2) Rattus norvegicus
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Symbol: Smarcc2
Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
Description: Predicted to have chromatin binding activity and histone binding activity. Involved in negative regulation of transcription, DNA-templated. Predicted to localize to the nuclear chromosome and nucleoplasm. Orthologous to human SMARCC2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; INTERACTS WITH bisphenol A; valproic acid; (-)-demecolcine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC685179; similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c2; SWI/SNF complex subunit SMARCC2
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.072,875,898 - 2,905,463 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.072,851,993 - 2,880,204 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.471,743,425 - 1,771,951 (+)NCBIRGSC3.4rn4RGSC3.4
Celera7754,570 - 783,204 (+)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Smarcc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1597704
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.