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Gene: Alkbh7 (alkB homolog 7) Rattus norvegicus
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Symbol: Alkbh7
Name: alkB homolog 7
Description: Predicted to be involved in several processes, including fatty acid metabolic process; regulation of lipid storage; and regulation of mitochondrial membrane permeability involved in programmed necrotic cell death. Predicted to localize to mitochondrial matrix. Orthologous to human ALKBH7 (alkB homolog 7); INTERACTS WITH (+)-schisandrin B; 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: alkB, alkylation repair homolog 7; alkB, alkylation repair homolog 7 (E. coli); alkylated DNA repair protein alkB homolog 7; alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial; LOC679944; similar to spermatogenesis associated 11
Orthologs:
Homo sapiens (human) : ALKBH7 (alkB homolog 7)  HGNC  Alliance
Mus musculus (house mouse) : Alkbh7 (alkB homolog 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Alkbh7 (alkB homolog 7)
Pan paniscus (bonobo/pygmy chimpanzee) : ALKBH7 (alkB homolog 7)
Canis lupus familiaris (dog) : ALKBH7 (alkB homolog 7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Alkbh7 (alkB homolog 7)
Sus scrofa (pig) : ALKBH7 (alkB homolog 7)
Chlorocebus sabaeus (African green monkey) : ALKBH7 (alkB homolog 7)
Heterocephalus glaber (naked mole-rat) : Alkbh7 (alkB homolog 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0910,045,375 - 10,047,507 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,045,375 - 10,047,507 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,046,025 - 9,048,175 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera96,676,245 - 6,678,377 (-)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Alkbh7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1598126
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.