Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pam16 (presequence translocase associated motor 16) Rattus norvegicus
Analyze
Symbol: Pam16
Name: presequence translocase associated motor 16
Description: Involved in negative regulation of apoptotic DNA fragmentation and negative regulation of release of cytochrome c from mitochondria. Predicted to localize to PAM complex, Tim23 associated import motor and extrinsic component of mitochondrial inner membrane. Orthologous to human PAM16 (presequence translocase associated motor 16); PARTICIPATES IN presequence pathway of mitochondrial protein import; INTERACTS WITH acetamide; bisphenol A; enniatin.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC679907; Magmas; mitochondria-associated granulocyte macrophage CSF signaling molecule; mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction; mitochondrial import inner membrane translocase subunit TIM16; presequence translocase associated motor 16 homolog; presequence translocase-associated motor 16 homolog; presequence translocase-associated motor 16 homolog (S. cerevisiae); similar to mitochondria-associated granulocyte macrophage CSF signaling molecule
Orthologs:
Related Pseudogenes: Magmas-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01011,146,359 - 11,153,936 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1011,146,359 - 11,153,936 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0109,911,717 - 9,919,294 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41011,072,402 - 11,079,980 (+)NCBIRGSC3.4rn4RGSC3.4
Celera109,905,330 - 9,912,908 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pam16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1598163
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.