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Gene: COLGALT2 (collagen beta(1-O)galactosyltransferase 2) Homo sapiens
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Symbol: COLGALT2
Name: collagen beta(1-O)galactosyltransferase 2
Description: Predicted to have procollagen galactosyltransferase activity. Predicted to localize to the endoplasmic reticulum lumen; PARTICIPATES IN lysine degradation pathway; O-linked glycan biosynthetic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-isobutyl-1-methyl-7H-xanthine; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: C1orf17; ColGalT 2; FLJ37771; FLJ37873; GLT25D2; glycosyltransferase 25 domain containing 2; glycosyltransferase 25 family member 2; hydroxylysine galactosyltransferase 2; KIAA0584; Procollagen galactosyltransferase; procollagen galactosyltransferase 2
Orthologs:
Mus musculus (house mouse) : Colgalt2 (collagen beta(1-O)galactosyltransferase 2)  MGI  Alliance
Rattus norvegicus (Norway rat) : Colgalt2 (collagen beta(1-O)galactosyltransferase 2)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Colgalt2 (collagen beta(1-O)galactosyltransferase 2)
Pan paniscus (bonobo/pygmy chimpanzee) : COLGALT2 (collagen beta(1-O)galactosyltransferase 2)
Canis lupus familiaris (dog) : COLGALT2 (collagen beta(1-O)galactosyltransferase 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Colgalt2 (collagen beta(1-O)galactosyltransferase 2)
Sus scrofa (pig) : COLGALT2 (collagen beta(1-O)galactosyltransferase 2)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl1183,929,854 - 184,037,729 (-)Ensembl
GRCh381183,929,662 - 184,037,728 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371183,898,988 - 184,006,904 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361182,171,589 - 182,273,486 (-)NCBINCBI36hg18NCBI36
Celera1157,015,884 - 157,117,798 (-)NCBI
Cytogenetic Map1q25.3NCBI
HuRef1155,140,707 - 155,242,623 (-)NCBIHuRef
CHM1_11185,321,459 - 185,429,561 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on COLGALT2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1602008
Created: 2007-04-27
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.