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Gene: SPTY2D1 (SPT2 chromatin protein domain containing 1) Homo sapiens
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Symbol: SPTY2D1
Name: SPT2 chromatin protein domain containing 1
Description: ENCODES a protein that exhibits DNA binding; histone binding; RNA polymerase I core binding (ortholog); INVOLVED IN histone exchange; nucleosome assembly; regulation of chromatin assembly; FOUND IN nucleolus; nucleoplasm; INTERACTS WITH (-)-epigallocatechin 3-gallate; 2,3,7,8-tetrachlorodibenzodioxine; 3-isobutyl-1-methyl-7H-xanthine
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: DKFZp686F1942; DKFZp686I068; FLJ39441; protein SPT2 homolog; Spt2; SPT2 domain-containing protein 1; SPT2, Suppressor of Ty, domain containing 1
Orthologs:
Mus musculus (house mouse) : Spty2d1 (SPT2 chromatin protein domain containing 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Spty2d1 (SPT2 chromatin protein domain containing 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spty2d1 (SPT2 chromatin protein domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SPTY2D1 (SPT2 chromatin protein domain containing 1)
Canis lupus familiaris (dog) : SPTY2D1 (SPT2 chromatin protein domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spty2d1 (SPT2 chromatin protein domain containing 1)
Sus scrofa (pig) : SPTY2D1 (SPT2 chromatin protein domain containing 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381118,606,401 - 18,634,823 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371118,627,948 - 18,656,020 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361118,584,524 - 18,612,596 (-)NCBINCBI36hg18NCBI36
Celera1118,762,827 - 18,790,934 (-)NCBI
Cytogenetic Map11p15.1NCBI
HuRef1118,312,969 - 18,341,076 (-)NCBIHuRef
CHM1_11118,627,298 - 18,655,375 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SPTY2D1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1603901
Created: 2007-04-28
Species: Homo sapiens
Last Modified: 2019-09-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.