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Gene: C2orf49 (chromosome 2 open reading frame 49) Homo sapiens
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Symbol: C2orf49
Name: chromosome 2 open reading frame 49
Description: Predicted to be involved in tRNA splicing, via endonucleolytic cleavage and ligation. Localizes to the tRNA-splicing ligase complex; INTERACTS WITH aflatoxin B1; benzo[a]pyrene; butanal.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ashwin; asw; FLJ45759; MGC5509
Orthologs:
Mus musculus (house mouse) : AI597479 (expressed sequence AI597479)  MGI  Alliance
Rattus norvegicus (Norway rat) : RGD1310553 (similar to expressed sequence AI597479)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102026964 (chromosome unknown open reading frame, human C2orf49)
Pan paniscus (bonobo/pygmy chimpanzee) : C2AH2orf49 (chromosome 2A C2orf49 homolog)
Canis lupus familiaris (dog) : C10H2orf49 (chromosome 10 C2orf49 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH2orf49 (chromosome unknown C2orf49 homolog)
Sus scrofa (pig) : C3H2orf49 (chromosome 3 C2orf49 homolog)
Chlorocebus sabaeus (African green monkey) : C14H2orf49 (chromosome 14 open reading frame, human C2orf49)
Heterocephalus glaber (naked mole-rat) : CUNH2orf49 (chromosome unknown C2orf49 homolog)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl2105,337,532 - 105,349,211 (+)Ensembl
GRCh382105,337,365 - 105,359,940 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372105,953,714 - 105,976,514 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362105,320,445 - 105,328,416 (+)NCBINCBI36hg18NCBI36
Celera2100,154,460 - 100,162,431 (+)NCBI
Cytogenetic Map2q12.2NCBI
HuRef299,722,503 - 99,730,474 (+)NCBIHuRef
CHM1_12105,958,123 - 105,969,580 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on C2orf49
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1604297
Created: 2007-04-28
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.