Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: VPS50 (VPS50 subunit of EARP/GARPII complex) Homo sapiens
Symbol: VPS50
Name: VPS50 subunit of EARP/GARPII complex
Description: Exhibits SNARE binding activity. Involved in endocytic recycling. Localizes to the EARP complex; INTERACTS WITH (-)-epigallocatechin 3-gallate; 2-hydroxypropanoic acid; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: CCDC132; coiled-coil domain containing 132; coiled-coil domain-containing protein 132; EARP/GARPII complex subunit VPS50; FLJ20097; FLJ23581; KIAA1861; MGC176659; syndetin; VPS50 EARP/GARPII complex subunit; VPS50, EARP/GARPII complex subunit; VPS54L
Mus musculus (house mouse) : Vps50 (VPS50 EARP/GARPII complex subunit)  MGI  Alliance
Rattus norvegicus (Norway rat) : Vps50 (VPS50 subunit of EARP/GARPII complex)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps50 (VPS50 subunit of EARP/GARPII complex)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS50 (VPS50 subunit of EARP/GARPII complex)
Canis lupus familiaris (dog) : VPS50 (VPS50 subunit of EARP/GARPII complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps50 (VPS50 subunit of EARP/GARPII complex)
Sus scrofa (pig) : VPS50 (VPS50 subunit of EARP/GARPII complex)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38793,232,340 - 93,361,123 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37792,861,653 - 92,990,435 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36792,699,589 - 92,826,274 (+)NCBINCBI36hg18NCBI36
Celera787,566,164 - 87,692,840 (+)NCBI
Cytogenetic Map7q21.2-q21.3NCBI
HuRef787,470,455 - 87,601,198 (+)NCBIHuRef
CHM1_1792,791,700 - 92,920,441 (+)NCBICHM1_1
CRA_TCAGchr7v2792,190,974 - 92,319,745 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status



Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
More on VPS50
Alliance Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1604352
Created: 2007-04-28
Species: Homo sapiens
Last Modified: 2019-11-26
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.