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Gene: VPS50 (VPS50 subunit of EARP/GARPII complex) Homo sapiens
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Symbol: VPS50
Name: VPS50 subunit of EARP/GARPII complex
Description: Exhibits SNARE binding activity. Involved in endocytic recycling. Localizes to the EARP complex; INTERACTS WITH (-)-epigallocatechin 3-gallate; 2-hydroxypropanoic acid; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: CCDC132; coiled-coil domain containing 132; coiled-coil domain-containing protein 132; EARP/GARPII complex subunit VPS50; FLJ20097; FLJ23581; KIAA1861; MGC176659; syndetin; VPS50 EARP/GARPII complex subunit; VPS50, EARP/GARPII complex subunit; VPS54L
Orthologs:
Mus musculus (house mouse) : Vps50 (VPS50 EARP/GARPII complex subunit)  MGI  Alliance
Rattus norvegicus (Norway rat) : Vps50 (VPS50 subunit of EARP/GARPII complex)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps50 (VPS50 subunit of EARP/GARPII complex)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS50 (VPS50 subunit of EARP/GARPII complex)
Canis lupus familiaris (dog) : VPS50 (VPS50 subunit of EARP/GARPII complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps50 (VPS50 subunit of EARP/GARPII complex)
Sus scrofa (pig) : VPS50 (VPS50 subunit of EARP/GARPII complex)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38793,232,340 - 93,361,123 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37792,861,653 - 92,990,435 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36792,699,589 - 92,826,274 (+)NCBINCBI36hg18NCBI36
Celera787,566,164 - 87,692,840 (+)NCBI
Cytogenetic Map7q21.2-q21.3NCBI
HuRef787,470,455 - 87,601,198 (+)NCBIHuRef
CHM1_1792,791,700 - 92,920,441 (+)NCBICHM1_1
CRA_TCAGchr7v2792,190,974 - 92,319,745 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on VPS50
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1604352
Created: 2007-04-28
Species: Homo sapiens
Last Modified: 2019-11-26
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.