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Gene: SSPOP (SCO-spondin, pseudogene) Homo sapiens
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Symbol: SSPOP
Name: SCO-spondin, pseudogene
Description: Predicted to have peptidase inhibitor activity. Predicted to be involved in several processes, including cell adhesion; negative regulation of peptidase activity; and nervous system development. Predicted to localize to extracellular space; PARTICIPATES IN Hedgehog signaling pathway; mTOR signaling pathway; Notch signaling pathway; INTERACTS WITH 5-aza-2'-deoxycytidine; aflatoxin B1; benzo[a]pyrene.
Type: pseudo
RefSeq Status: VALIDATED
Also known as: FLJ36112; FLJ45737; KIAA2036; SCO protein, thrombospondin domain containing; SCO-spondin; SCO-spondin homolog (Bos taurus); SSPO; subcommissural organ spondin
Orthologs:
Mus musculus (house mouse) : Sspo (SCO-spondin)  MGI  Alliance
Rattus norvegicus (Norway rat) : Sspo (SCO-spondin)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sspop (SCO-spondin, pseudogene)
Pan paniscus (bonobo/pygmy chimpanzee) : SSPOP (SCO-spondin, pseudogene)
Canis lupus familiaris (dog) : SSPO (SCO-spondin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sspop (SCO-spondin, pseudogene)
Sus scrofa (pig) : SSPOP (SCO-spondin, pseudogene)
Chlorocebus sabaeus (African green monkey) : SSPOP (SCO-spondin, pseudogene)
Heterocephalus glaber (naked mole-rat) : Sspop (SCO-spondin, pseudogene)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl7149,776,042 - 149,833,979 (+)EnsemblGRCh38hg38GRCh38
GRCh387149,776,042 - 149,833,965 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh377149,473,131 - 149,531,054 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367149,104,064 - 149,161,987 (+)NCBINCBI36hg18NCBI36
Celera7144,142,344 - 144,200,269 (+)NCBI
Cytogenetic Map7q36.1NCBI
HuRef7143,549,056 - 143,606,500 (+)NCBIHuRef
CHM1_17149,481,703 - 149,539,633 (+)NCBICHM1_1
CRA_TCAGchr7v27148,811,145 - 148,869,073 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
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Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SSPOP
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1604386
Created: 2007-04-28
Species: Homo sapiens
Last Modified: 2020-03-24
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.