Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: C5orf38 (chromosome 5 open reading frame 38) Homo sapiens
Analyze
Symbol: C5orf38
Name: chromosome 5 open reading frame 38
Description: Predicted to localize to the extracellular region; INTERACTS WITH 17beta-estradiol; cisplatin; triclosan.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: CEI; coordinated expression to IRX2; coordinated expression to IRXA2 homeobox; coordinated expression to IRXA2 protein; IRX2 neighbor; IRX2NB; MGC126657; MGC126683
Orthologs:
Pan paniscus (bonobo/pygmy chimpanzee) : C5H5orf38 (chromosome 5 C5orf38 homolog)
Sus scrofa (pig) : C16H5orf38 (chromosome 16 C5orf38 homolog)
Chlorocebus sabaeus (African green monkey) : C4H5orf38 (chromosome 4 open reading frame, human C5orf38)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl52,752,131 - 2,755,397 (+)EnsemblGRCh38hg38GRCh38
GRCh3852,751,893 - 2,758,578 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3752,752,058 - 2,755,511 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3652,805,262 - 2,808,511 (+)NCBINCBI36hg18NCBI36
Celera52,784,111 - 2,787,360 (+)NCBI
Cytogenetic Map5p15.33NCBI
HuRef52,727,798 - 2,730,739 (+)NCBIHuRef
CHM1_152,752,113 - 2,755,379 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - uncurated

Genomics

Comparative Map Data
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on C5orf38
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1606695
Created: 2007-04-29
Species: Homo sapiens
Last Modified: 2020-03-24
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.