Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: PLOD2 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 2) Homo sapiens
Analyze
Symbol: PLOD2
Name: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2
CRRD ID: 1606836
Description: Exhibits procollagen-lysine 5-dioxygenase activity. Involved in hydroxylysine biosynthetic process; peptidyl-lysine hydroxylation; and response to hypoxia. Localizes to extracellular exosome.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: BRKS2; LH2; lysine hydroxylase 2; lysyl hydroxlase 2; lysyl hydroxylase 2; procollagen-lysine 5-dioxygenase; procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2; telopeptide lysyl hydroxylase; TLH
Orthologs:
Mus musculus (house mouse) : Plod2 (procollagen lysine, 2-oxoglutarate 5-dioxygenase 2)  MGI  Alliance
Rattus norvegicus (Norway rat) : Plod2 (procollagen lysine, 2-oxoglutarate 5-dioxygenase 2)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Plod2 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PLOD2 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 2)
Canis lupus familiaris (dog) : PLOD2 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Plod2 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 2)
Sus scrofa (pig) : PLOD2 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 2)
Chlorocebus sabaeus (African green monkey) : PLOD2 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 2)
Heterocephalus glaber (naked mole-rat) : Plod2 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 2)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3146,069,440 - 146,163,653 (-)EnsemblGRCh38hg38GRCh38
GRCh383146,069,437 - 146,161,184 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh373145,787,225 - 145,879,282 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363147,269,917 - 147,361,972 (-)NCBINCBI36hg18NCBI36
Celera3144,204,566 - 144,296,620 (-)NCBI
Cytogenetic Map3q24NCBI
HuRef3143,164,166 - 143,256,088 (-)NCBIHuRef
CHM1_13145,750,160 - 145,842,267 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on PLOD2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1606836
Created: 2007-04-29
Species: Homo sapiens
Last Modified: 2020-11-10
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.