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Gene: C9orf50 (chromosome 9 open reading frame 50) Homo sapiens
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Symbol: C9orf50
Name: chromosome 9 open reading frame 50
Description: INTERACTS WITH 3-isobutyl-1-methyl-7H-xanthine; 4,4'-sulfonyldiphenol; antirheumatic drug
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: FLJ35803; hypothetical protein LOC375759; uncharacterized protein C9orf50
Orthologs:
Mus musculus (house mouse) : 1700001O22Rik (RIKEN cDNA 1700001O22 gene)  MGI  Alliance
Rattus norvegicus (Norway rat) : RGD1311084 (similar to 1700113K14Rik protein)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102020729 (chromosome unknown open reading frame, human C9orf50)
Pan paniscus (bonobo/pygmy chimpanzee) : C9H9orf50 (chromosome 9 C9orf50 homolog)
Canis lupus familiaris (dog) : C9H9orf50 (chromosome 9 C9orf50 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH9orf50 (chromosome unknown C9orf50 homolog)
Sus scrofa (pig) : C1H9orf50 (chromosome 1 C9orf50 homolog)
Chlorocebus sabaeus (green monkey) : C12H9orf50 (chromosome 12 open reading frame, human C9orf50)
Heterocephalus glaber (naked mole-rat) : CUNH9orf50 (chromosome unknown C9orf50 homolog)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl9129,612,225 - 129,620,776 (-)Ensembl
GRCh389129,612,225 - 129,622,275 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh379132,374,504 - 132,383,055 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369131,414,325 - 131,422,876 (-)NCBINCBI36hg18NCBI36
Celera9103,025,311 - 103,033,860 (-)NCBI
Cytogenetic Map9q34.11NCBI
HuRef9101,973,658 - 101,982,115 (-)NCBIHuRef
CHM1_19132,523,217 - 132,531,768 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on C9orf50
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1606874
Created: 2007-04-29
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.