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Gene: JMJD4 (jumonji domain containing 4) Homo sapiens
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Symbol: JMJD4
Name: jumonji domain containing 4
CRRD ID: 1607006
Description: Exhibits 2-oxoglutarate-dependent dioxygenase activity. Involved in positive regulation of translational termination and protein hydroxylation. Localizes to cytoplasm; INTERACTS WITH all-trans-retinoic acid; atrazine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2-oxoglutarate and iron-dependent oxygenase JMJD4; 2-oxoglutarate- and Fe(II)-dependent oxygenase; C4 lysyl hydroxylase; FLJ12517; jmjC domain-containing protein 4; jumonji domain-containing protein 4; lysyl-hydroxylase JMJD4; MGC129896
Orthologs:
Mus musculus (house mouse) : Jmjd4 (jumonji domain containing 4)  MGI  Alliance
Rattus norvegicus (Norway rat) : Jmjd4 (jumonji domain containing 4)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Jmjd4 (jumonji domain containing 4)
Pan paniscus (bonobo/pygmy chimpanzee) : JMJD4 (jumonji domain containing 4)
Canis lupus familiaris (dog) : JMJD4 (jumonji domain containing 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Jmjd4 (jumonji domain containing 4)
Sus scrofa (pig) : JMJD4 (jumonji domain containing 4)
Chlorocebus sabaeus (African green monkey) : JMJD4 (jumonji domain containing 4)
Heterocephalus glaber (naked mole-rat) : Jmjd4 (jumonji domain containing 4)
more info ...
Related Pseudogenes: AC108673.1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1227,730,425 - 227,735,411 (-)EnsemblGRCh38hg38GRCh38
GRCh381227,731,191 - 227,735,499 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371227,918,890 - 227,923,284 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361225,985,558 - 225,989,735 (-)NCBINCBI36hg18NCBI36
Celera1201,110,595 - 201,114,816 (-)NCBI
Cytogenetic Map1q42.13NCBI
HuRef1198,435,453 - 198,439,675 (-)NCBIHuRef
CHM1_11229,191,305 - 229,195,527 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on JMJD4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1607006
Created: 2007-04-29
Species: Homo sapiens
Last Modified: 2020-10-06
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.