Btnl6 (butyrophilin-like 6) - Chinchilla Research Resource Database
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Gene: Btnl6 (butyrophilin-like 6) Mus musculus
Analyze
Symbol: Btnl6
Name: butyrophilin-like 6
CRRD ID: 1609618
Description: Predicted to have signaling receptor binding activity. Involved in extrathymic T cell selection. Predicted to localize to external side of plasma membrane. Orthologous to human BTNL3 (butyrophilin like 3) and BTNL8 (butyrophilin like 8).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: EG624681; Gm6519; NG1; NG13
Orthologs:
No known orthologs. homologs ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391734,726,844 - 34,737,750 (-)NCBI
GRCm381734,507,870 - 34,518,776 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,507,804 - 34,517,352 (-)EnsemblGRCm38mm10GRCm38
MGSCv371734,644,880 - 34,654,297 (-)NCBIGRCm37mm9NCBIm37
MGSCv361734,115,860 - 34,125,953 (-)NCBImm8
Celera1737,602,952 - 37,612,369 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10803852   PMID:21873635   PMID:27528202   PMID:27641500  


Genomics


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
CRRD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17312791337128037Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17392461548559063Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined480447745359340Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17480447746158776Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17480447747574740Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined480447765330362Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17667496240674962Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17836594042366175Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17836594042366175Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined17986241186688972Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171065914544659245Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1098759739053168Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1166699745667145Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171177921045779210Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171206732483054339Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171223281346232813Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171242798746427987Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171390439847904522Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171484267848842786Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171484267848842786Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171484267848842786Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171484267848842786Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171660074750600869Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171660074750600869Mouse
1301505Tir1_mtrypanosome infection response 1 (mouse)Not determined171660074750600869Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171681096950811104Mouse
1302042Acsns3_mAngiostrongylus costaricensis nematode susceptibility 3 (mouse)Not determined171724323451243371Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171724323451243371Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171724323451243371Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171724323451243371Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171724323451243371Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171795643651959238Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171819938152202007Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171820316552205351Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171883413352834133Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172430185958301973Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172485760955405969Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172536594043665344Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172574029459740461Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172618203852604676Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172628636340794146Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172657408160574223Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172749681845311728Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172750432261504322Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172765914543574223Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172831148062311728Mouse
11038694Pas19_mpulmonary adenoma susceptibility 19 (mouse)172949219034535463Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined172982162963821740Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3072257564722705Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3076892947728778Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173184267837333884Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173244145235301060Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173290000053800000Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173360074735939288Mouse
1301759Sles1_msystemic lupus erythmatosus suppressor 1 (mouse)Not determined173400091634956961Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:432
Count of miRNA genes:325
Interacting mature miRNAs:352
Transcripts:ENSMUST00000075483, ENSMUST00000173164
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000075483   ⟹   ENSMUSP00000074927
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1734,507,935 - 34,517,352 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173164
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1734,507,804 - 34,517,352 (-)Ensembl
RefSeq Acc Id: NM_030747   ⟹   NP_109672
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,726,909 - 34,736,326 (-)NCBI
GRCm381734,507,935 - 34,517,352 (-)ENTREZGENE
MGSCv371734,644,880 - 34,654,297 (-)RGD
Celera1737,602,952 - 37,612,369 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030249938   ⟹   XP_030105798
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,726,844 - 34,737,750 (-)NCBI
GRCm381734,507,870 - 34,518,776 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_109672 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105798 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC05291 (Get FASTA)   NCBI Sequence Viewer  
  CAM18608 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_109672   ⟸   NM_030747
- Peptide Label: precursor
- UniProtKB: A2CG22 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030105798   ⟸   XM_030249938
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000074927   ⟸   ENSMUST00000075483
Protein Domains
B30.2/SPRY   Ig-like

Promoters
RGD ID:13675702
Promoter ID:EPDNEW_M22000
Type:single initiation site
Name:Btnl6_1
Description:Mus musculus butyrophilin-like 6 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,517,365 - 34,517,425EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1932038 AgrOrtholog
Ensembl Genes ENSMUSG00000092618 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000074927 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000075483 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.920 UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/TrEMBL
InterPro B30.2/SPRY UniProtKB/TrEMBL
  B30.2/SPRY_sf UniProtKB/TrEMBL
  Butyrophylin UniProtKB/TrEMBL
  ConA-like_dom UniProtKB/TrEMBL
  Ig-like UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_V-set UniProtKB/TrEMBL
  SPRY_rcpt UniProtKB/TrEMBL
KEGG Report mmu:624681 UniProtKB/TrEMBL
MGD MGI:1932038 ENTREZGENE
NCBI Gene 624681 ENTREZGENE
Pfam SPRY UniProtKB/TrEMBL
  V-set UniProtKB/TrEMBL
PhenoGen Btnl6 PhenoGen
PRINTS BUTYPHLNCDUF UniProtKB/TrEMBL
PROSITE B302_SPRY UniProtKB/TrEMBL
  IG_LIKE UniProtKB/TrEMBL
SMART SM00409 UniProtKB/TrEMBL
  SPRY UniProtKB/TrEMBL
Superfamily-SCOP ConA_like_lec_gl UniProtKB/TrEMBL
  SSF48726 UniProtKB/TrEMBL
UniGene Mm.471592 ENTREZGENE
UniProt A2CG22 ENTREZGENE, UniProtKB/TrEMBL