Gene: Neat1 (nuclear paraspeckle assembly transcript 1 (non-protein coding)) Mus musculus
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Symbol:
Neat1
Name:
nuclear paraspeckle assembly transcript 1 (non-protein coding)
Description:
Involved in cellular component maintenance; nuclear body organization; and response to wounding. Localizes to the paraspeckles. Is expressed in several structures, including Harderian gland; adrenal gland; genitourinary system; gut; and hemolymphoid system gland. Orthologous to human NEAT1 (nuclear paraspeckle assembly transcript 1).
Type:
ncrna
RefSeq Status:
VALIDATED
Also known as:
2310043N10Rik; VINC
Orthologs:
Latest Assembly:
GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm38 19 5,824,708 - 5,845,480 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 MGSCv37 19 5,842,302 - 5,845,478 (-) NCBI GRCm37 mm9 NCBIm37 MGSCv36 19 5,796,401 - 5,845,579 (+) NCBI mm8 Celera 19 5,712,378 - 5,715,554 (-) NCBI Celera Cytogenetic Map 19 A NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - ClinVar
malignant glioma ISO RGD:2300351 8554872 ClinVar Annotator: match by term: Ependymoma ClinVar
Imported Annotations - CTD
juvenile rheumatoid arthritis ISO RGD:2300351 11554173 CTD Direct Evidence: marker/mechanism CTD PMID:19565504 Liver Neoplasms ISO RGD:2300351 11554173 CTD Direct Evidence: marker/mechanism CTD PMID:27064257 Prostatic Neoplasms ISO RGD:2300351 11554173 CTD Direct Evidence: marker/mechanism CTD PMID:29662167
(-)-epigallocatechin 3-gallate increases expression ISO RGD:2300351 6480464 epigallocatechin gallate results in increased expression of NEAT1 mRNA CTD PMID:27270317 (S)-nicotine decreases expression ISO RGD:2300351 6480464 Nicotine results in decreased expression of NEAT1 mRNA CTD PMID:23825647 (S)-nicotine increases splicing ISO RGD:2300351 6480464 Nicotine results in increased splicing of NEAT1 mRNA alternative form CTD PMID:23825647 17beta-estradiol decreases expression ISO RGD:2300351 6480464 Estradiol results in decreased expression of NEAT1 mRNA CTD PMID:19167446 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of NEAT1 mRNA CTD PMID:19770486 2-hydroxypropanoic acid increases expression ISO RGD:2300351 6480464 Lactic Acid results in increased expression of NEAT1 mRNA CTD PMID:30851411 4-hydroxyphenyl retinamide increases expression ISO RGD:2300351 6480464 Fenretinide results in increased expression of NEAT1 mRNA CTD PMID:15958647 aflatoxin B1 increases expression EXP 6480464 Aflatoxin B1 results in increased expression of NEAT1 mRNA CTD PMID:19770486 aflatoxin B1 increases methylation ISO RGD:2300351 6480464 Aflatoxin B1 results in increased methylation of NEAT1 polyA tail CTD PMID:30157460 aflatoxin B1 decreases expression ISO RGD:2300351 6480464 Aflatoxin B1 results in decreased expression of NEAT1 mRNA CTD PMID:22100608 aflatoxin B1 increases expression ISO RGD:2300351 6480464 Aflatoxin B1 results in increased expression of NEAT1 mRNA CTD PMID:21641981 all-trans-retinoic acid increases expression ISO RGD:2300351 6480464 Tretinoin results in increased expression of NEAT1 mRNA CTD PMID:21934132 belinostat multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with belinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1, 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of NEAT1 mRNA CTD PMID:27188386 belinostat increases expression ISO RGD:2300351 6480464 belinostat results in increased expression of NEAT1 mRNA CTD PMID:26272509 benzo[a]pyrene decreases expression EXP 6480464 Benzo(a)pyrene results in decreased expression of NEAT1 mRNA CTD PMID:19770486 benzo[a]pyrene increases expression ISO RGD:2300351 6480464 Benzo(a)pyrene results in increased expression of NEAT1 mRNA CTD PMID:21871943 , PMID:26238291 benzo[a]pyrene diol epoxide I decreases expression ISO RGD:2300351 6480464 7 more ... CTD PMID:19150397 , PMID:20018196 benzo[b]fluoranthene increases expression EXP 6480464 benzo(b)fluoranthene results in increased expression of NEAT1 mRNA CTD PMID:26377693 benzo[e]pyrene increases methylation ISO RGD:2300351 6480464 benzo(e)pyrene results in increased methylation of NEAT1 polyA tail CTD PMID:30157460 Benzo[k]fluoranthene increases expression EXP 6480464 benzo(k)fluoranthene results in increased expression of NEAT1 mRNA CTD PMID:26377693 bisphenol A affects expression ISO RGD:2300351 6480464 bisphenol A affects the expression of NEAT1 mRNA CTD PMID:30903817 bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of NEAT1 mRNA CTD PMID:29165653 bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of NEAT1 mRNA CTD PMID:30951980 bisphenol F multiple interactions EXP 6480464 [bisphenol F co-treated with LIF protein] results in increased expression of NEAT1 mRNA CTD PMID:30951980 bortezomib increases expression ISO RGD:2300351 6480464 Bortezomib results in increased expression of NEAT1 mRNA CTD PMID:20977926 carbon nanotube decreases expression EXP 6480464 Nanotubes, Carbon analog results in decreased expression of NEAT1 mRNA, Nanotubes, Carbon results in decreased expression of NEAT1 mRNA CTD PMID:25554681 carbon nanotube affects expression EXP 6480464 Nanotubes, Carbon affects the expression of NEAT1 mRNA CTD PMID:25620056 chromium(6+) affects expression EXP 6480464 chromium hexavalent ion affects the expression of NEAT1 mRNA CTD PMID:28472532 chrysene increases expression EXP 6480464 chrysene results in increased expression of NEAT1 mRNA CTD PMID:26377693 cisplatin affects response to substance ISO RGD:2300351 6480464 NEAT1 protein affects the susceptibility to Cisplatin CTD PMID:16217747 , PMID:30291867 cisplatin multiple interactions ISO RGD:2300351 6480464 [Cisplatin co-treated with jinfukang] results in increased expression of NEAT1 mRNA more ... CTD PMID:27270317 more ... cisplatin affects uptake ISO RGD:2300351 6480464 NEAT1 mRNA affects the uptake of Cisplatin CTD PMID:27270317 copper atom multiple interactions ISO RGD:2300351 6480464 [NSC 689534 binds to Copper] which results in increased expression of NEAT1 mRNA CTD PMID:20971185 copper(0) multiple interactions ISO RGD:2300351 6480464 [NSC 689534 binds to Copper] which results in increased expression of NEAT1 mRNA CTD PMID:20971185 coumestrol multiple interactions ISO RGD:2300351 6480464 [Coumestrol co-treated with 2, 3-bis(3'-hydroxybenzyl)butyrolactone] results in decreased expression of NEAT1 mRNA CTD PMID:19167446 crocidolite asbestos increases expression ISO RGD:2300351 6480464 Asbestos, Crocidolite results in increased expression of NEAT1 mRNA CTD PMID:18687144 cyclosporin A decreases expression EXP 6480464 Cyclosporine results in decreased expression of NEAT1 mRNA CTD PMID:19770486 DDT increases expression ISO RGD:2300351 6480464 DDT results in increased expression of NEAT1 mRNA CTD PMID:25014179 dibenz[a,h]anthracene decreases expression EXP 6480464 1 more ... CTD PMID:26377693 dibutyl phthalate increases expression EXP 6480464 Dibutyl Phthalate results in increased expression of NEAT1 mRNA CTD PMID:17361019 , PMID:21266533 dioxygen multiple interactions EXP 6480464 [NFE2L2 protein affects the susceptibility to Oxygen] which affects the expression of NEAT1 mRNA CTD PMID:30529165 dorsomorphin multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with belinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 Enterolactone multiple interactions ISO RGD:2300351 6480464 [Coumestrol co-treated with 2, 3-bis(3'-hydroxybenzyl)butyrolactone] results in decreased expression of NEAT1 mRNA CTD PMID:19167446 entinostat increases expression ISO RGD:2300351 6480464 entinostat results in increased expression of NEAT1 mRNA CTD PMID:26272509 , PMID:27188386 entinostat multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1, 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of NEAT1 mRNA CTD PMID:27188386 fipronil multiple interactions ISO RGD:2300351 6480464 [fipronil co-treated with DEET] results in decreased expression of NEAT1 mRNA CTD PMID:28991164 fipronil decreases expression ISO RGD:2300351 6480464 fipronil results in decreased expression of NEAT1 mRNA CTD PMID:28991164 fluoranthene multiple interactions EXP 6480464 [1-methylanthracene co-treated with fluoranthene] results in increased expression of NEAT1 mRNA CTD PMID:28329830 furan decreases expression EXP 6480464 furan results in decreased expression of NEAT1 mRNA CTD PMID:24183702 genistein increases expression ISO RGD:2300351 6480464 Genistein results in increased expression of NEAT1 mRNA CTD PMID:26865667 hydralazine multiple interactions ISO RGD:2300351 6480464 [Hydralazine co-treated with Valproic Acid] results in decreased expression of NEAT1 mRNA CTD PMID:17183730 melphalan decreases expression ISO RGD:2300351 6480464 Melphalan results in decreased expression of NEAT1 mRNA CTD PMID:22363485 mercury dibromide increases expression ISO RGD:2300351 6480464 mercuric bromide results in increased expression of NEAT1 mRNA CTD PMID:26272509 mercury dibromide multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1, 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of NEAT1 mRNA CTD PMID:27188386 methapyrilene increases methylation ISO RGD:2300351 6480464 Methapyrilene results in increased methylation of NEAT1 polyA tail CTD PMID:30157460 methylmercury chloride increases expression ISO RGD:2300351 6480464 methylmercuric chloride results in increased expression of NEAT1 mRNA CTD PMID:23179753 more ... methylmercury chloride decreases expression ISO RGD:2300351 6480464 methylmercuric chloride results in decreased expression of NEAT1 mRNA CTD PMID:28001369 methylmercury chloride multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with methylmercuric chloride co-treated with dorsomorphin co-treated with 4-(5-benzo(1, 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of NEAT1 mRNA CTD PMID:27188386 Monomethyl phthalate affects expression ISO RGD:2300351 6480464 monomethyl phthalate affects the expression of NEAT1 mRNA CTD PMID:29385630 N,N-diethyl-m-toluamide decreases expression ISO RGD:2300351 6480464 DEET results in decreased expression of NEAT1 mRNA CTD PMID:28991164 N,N-diethyl-m-toluamide multiple interactions ISO RGD:2300351 6480464 [fipronil co-treated with DEET] results in decreased expression of NEAT1 mRNA CTD PMID:28991164 N-nitrosodiethylamine multiple interactions EXP 6480464 [Diethylnitrosamine co-treated with Phenobarbital] results in increased expression of NEAT1 mRNA CTD PMID:24535843 N-nitrosodiethylamine increases expression EXP 6480464 Diethylnitrosamine results in increased expression of NEAT1 mRNA CTD PMID:24535843 nicotine decreases expression ISO RGD:2300351 6480464 Nicotine results in decreased expression of NEAT1 mRNA CTD PMID:23825647 nicotine increases splicing ISO RGD:2300351 6480464 Nicotine results in increased splicing of NEAT1 mRNA alternative form CTD PMID:23825647 p-chloromercuribenzoic acid increases expression ISO RGD:2300351 6480464 p-Chloromercuribenzoic Acid results in increased expression of NEAT1 mRNA CTD PMID:26272509 p-chloromercuribenzoic acid multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1, 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of NEAT1 mRNA CTD PMID:27188386 panobinostat increases expression ISO RGD:2300351 6480464 panobinostat results in increased expression of NEAT1 mRNA CTD PMID:26272509 panobinostat multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1, 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of NEAT1 mRNA CTD PMID:27188386 paracetamol increases expression ISO RGD:2300351 6480464 Acetaminophen results in increased expression of NEAT1 mRNA CTD PMID:26497421 , PMID:29067470 pentanal decreases expression ISO RGD:2300351 6480464 pentanal results in decreased expression of NEAT1 mRNA CTD PMID:26079696 perfluorooctane-1-sulfonic acid decreases expression ISO RGD:2300351 6480464 perfluorooctane sulfonic acid results in decreased expression of NEAT1 mRNA CTD PMID:27153767 phenobarbital multiple interactions EXP 6480464 [Diethylnitrosamine co-treated with Phenobarbital] results in increased expression of NEAT1 mRNA CTD PMID:24535843 phenobarbital affects expression EXP 6480464 Phenobarbital affects the expression of NEAT1 mRNA CTD PMID:23091169 phenylmercury acetate increases expression ISO RGD:2300351 6480464 Phenylmercuric Acetate results in increased expression of NEAT1 mRNA CTD PMID:26272509 phenylmercury acetate multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1, 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of NEAT1 mRNA CTD PMID:27188386 pirinixic acid multiple interactions EXP 6480464 [pirinixic acid co-treated with PPARA] results in increased expression of NEAT1 mRNA CTD PMID:20813756 pirinixic acid increases expression EXP 6480464 pirinixic acid results in increased expression of NEAT1 mRNA CTD PMID:20813756 , PMID:23811191 pirinixic acid increases expression ISO RGD:2300351 6480464 pirinixic acid results in increased expression of NEAT1 mRNA CTD PMID:18518955 rac-lactic acid increases expression ISO RGD:2300351 6480464 Lactic Acid results in increased expression of NEAT1 mRNA CTD PMID:30851411 SB 431542 multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with belinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 silver atom increases expression EXP 6480464 Silver results in increased expression of NEAT1 mRNA CTD PMID:27131904 silver(0) increases expression EXP 6480464 Silver results in increased expression of NEAT1 mRNA CTD PMID:27131904 sodium arsenate increases expression EXP 6480464 sodium arsenate results in increased expression of NEAT1 mRNA CTD PMID:21795629 succimer multiple interactions EXP 6480464 [Succimer binds to Magnetite Nanoparticles] which results in decreased expression of NEAT1 mRNA CTD PMID:21641980 tamoxifen affects expression EXP 6480464 Tamoxifen affects the expression of NEAT1 mRNA CTD PMID:20937368 tetraphene affects expression EXP 6480464 benz(a)anthracene affects the expression of NEAT1 mRNA CTD PMID:26377693 trichostatin A increases expression ISO RGD:2300351 6480464 trichostatin A results in increased expression of NEAT1 mRNA CTD PMID:24935251 , PMID:26272509 trichostatin A multiple interactions ISO RGD:2300351 6480464 [NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1, 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of NEAT1 mRNA CTD PMID:27188386 ursodeoxycholic acid affects expression ISO RGD:2300351 6480464 Ursodeoxycholic Acid affects the expression of NEAT1 mRNA CTD PMID:18422935 valproic acid multiple interactions ISO RGD:2300351 6480464 [Hydralazine co-treated with Valproic Acid] results in decreased expression of NEAT1 mRNA more ... CTD PMID:17183730 , PMID:27188386 valproic acid affects expression ISO RGD:2300351 6480464 Valproic Acid affects the expression of NEAT1 mRNA CTD PMID:25979313 valproic acid increases expression ISO RGD:2300351 6480464 Valproic Acid results in increased expression of NEAT1 mRNA CTD PMID:19101580 more ... vorinostat increases expression ISO RGD:2300351 6480464 vorinostat results in increased expression of NEAT1 mRNA CTD PMID:26272509 , PMID:27188386