Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Smcr8 (Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)) Mus musculus
Analyze
Symbol: Smcr8
Name: Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
Description: Predicted to contribute to Rab guanyl-nucleotide exchange factor activity. Involved in regulation of autophagy. Localizes to the cytoplasm. Orthologous to human SMCR8 (SMCR8-C9orf72 complex subunit); INTERACTS WITH 1,2-dichloroethane; 2,2',4,4'-Tetrabromodiphenyl ether; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2310076G09Rik; AI642055; D030073L15Rik; guanine nucleotide exchange protein SMCR8; MGC103295; Smith-Magenis syndrome chromosomal region candidate gene 8 protein homolog
Orthologs:
Homo sapiens (human) : SMCR8 (SMCR8-C9orf72 complex subunit)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Smcr8 (SMCR8-C9orf72 complex subunit)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smcr8 (SMCR8-C9orf72 complex subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : SMCR8 (SMCR8-C9orf72 complex subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smcr8 (SMCR8-C9orf72 complex subunit)
Sus scrofa (pig) : SMCR8 (SMCR8-C9orf72 complex subunit)
Chlorocebus sabaeus (African green monkey) : SMCR8 (SMCR8-C9orf72 complex subunit)
Heterocephalus glaber (naked mole-rat) : Smcr8 (SMCR8-C9orf72 complex subunit)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl1160,777,524 - 60,788,287 (+)EnsemblGRCm38mm10GRCm38
GRCm381160,777,525 - 60,788,287 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371160,591,027 - 60,601,789 (+)NCBIGRCm37mm9NCBIm37
MGSCv361161,208,627 - 61,212,152 (+)NCBImm8
MGSCv361160,593,737 - 60,597,262 (+)NCBImm8
Cytogenetic Map11 B2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Cell Lines
Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Smcr8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1614898
Created: 2007-04-30
Species: Mus musculus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.