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Gene: Sox5 (SRY (sex determining region Y)-box 5) Mus musculus
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Symbol: Sox5
Name: SRY (sex determining region Y)-box 5
Description: Exhibits DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including neurogenesis; positive regulation of chondrocyte differentiation; and regulation of transcription, DNA-templated. Localizes to nuclear transcription factor complex. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Orthologous to human SOX5 (SRY-box transcription factor 5); INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A730017D01Rik; AI528773; MGC124352; RIKEN cDNA A730017D01 gene; Sox5-BLM isoform; SRY-box containing gene 5; transcription factor SOX-5
Orthologs:
Homo sapiens (human) : SOX5 (SRY-box transcription factor 5)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Sox5 (SRY-box transcription factor 5)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sox5 (SRY-box transcription factor 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SOX5 (SRY-box transcription factor 5)
Canis lupus familiaris (dog) : SOX5 (SRY-box transcription factor 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sox5 (SRY-box transcription factor 5)
Sus scrofa (pig) : SOX5 (SRY-box transcription factor 5)
Chlorocebus sabaeus (African green monkey) : SOX5 (SRY-box transcription factor 5)
Heterocephalus glaber (naked mole-rat) : Sox5 (SRY-box transcription factor 5)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl6143,828,425 - 144,781,977 (-)EnsemblGRCm38mm10GRCm38
GRCm386143,828,425 - 144,782,287 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv376143,781,349 - 144,158,078 (-)NCBIGRCm37mm9NCBIm37
MGSCv366143,790,051 - 144,166,639 (-)NCBImm8
Celera6146,885,590 - 147,265,302 (-)NCBICelera
Cytogenetic Map6G3NCBI
cM Map676.14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
Nomenclature History
 
More on Sox5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1615159
Created: 2007-04-30
Species: Mus musculus
Last Modified: 2020-05-05
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.