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Gene: Kdm5d (lysine (K)-specific demethylase 5D) Mus musculus
Symbol: Kdm5d
Name: lysine (K)-specific demethylase 5D
CRRD ID: 1615943
Description: Predicted to have androgen receptor binding activity and histone demethylase activity (H3-trimethyl-K4 specific). Involved in T cell antigen processing and presentation. Predicted to localize to fibrillar center and histone methyltransferase complex. Is expressed in several structures, including early conceptus; genitourinary system; heart; liver; and lung. Orthologous to human KDM5D (lysine demethylase 5D); PARTICIPATES IN histone modification pathway; INTERACTS WITH aflatoxin B1; benzo[a]pyrene; dimethylarsinic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: [histone H3]-trimethyl-L-lysine(4) demethylase 5D; H-Y; histocompatibility Y antigen; histone demethylase JARID1D; HY; Jari; Jarid1d; jumonji, AT rich interactive domain 1D (Rbp2 like); jumonji/ARID domain-containing protein 1D; lysine-specific demethylase 5D; selected mouse cDNA on the Y; Smc; Smcy
Homo sapiens (human) : KDM5D (lysine demethylase 5D)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Kdm5d (lysine demethylase 5D)  Alliance
Chlorocebus sabaeus (African green monkey) : KDM5D (lysine demethylase 5D)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm39Y897,566 - 943,813 (+)NCBI
GRCm38Y897,566 - 943,813 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblY897,788 - 956,786 (+)EnsemblGRCm38mm10GRCm38
MGSCv37Y234,231 - 280,254 (+)NCBIGRCm37mm9NCBIm37
MGSCv36Y234,231 - 280,254 (+)NCBImm8
CeleraY3,732,939 - 3,779,374 (+)NCBICelera
Cytogenetic MapYA1NCBI
JBrowse: View Region in Genome Browser (JBrowse)

References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Kdm5d
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1615943
Created: 2007-04-30
Species: Mus musculus
Last Modified: 2020-10-13
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.