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Gene: Kdm5d (lysine (K)-specific demethylase 5D) Mus musculus
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Symbol: Kdm5d
Name: lysine (K)-specific demethylase 5D
CRRD ID: 1615943
Description: Predicted to have androgen receptor binding activity and histone demethylase activity (H3-trimethyl-K4 specific). Involved in T cell antigen processing and presentation. Predicted to localize to fibrillar center and histone methyltransferase complex. Is expressed in several structures, including early conceptus; genitourinary system; heart; liver; and lung. Orthologous to human KDM5D (lysine demethylase 5D); PARTICIPATES IN histone modification pathway; INTERACTS WITH aflatoxin B1; benzo[a]pyrene; dimethylarsinic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: [histone H3]-trimethyl-L-lysine(4) demethylase 5D; H-Y; histocompatibility Y antigen; histone demethylase JARID1D; HY; Jari; Jarid1d; jumonji, AT rich interactive domain 1D (Rbp2 like); jumonji/ARID domain-containing protein 1D; lysine-specific demethylase 5D; selected mouse cDNA on the Y; Smc; Smcy
Orthologs:
Homo sapiens (human) : KDM5D (lysine demethylase 5D)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Kdm5d (lysine demethylase 5D)  Alliance
Chlorocebus sabaeus (African green monkey) : KDM5D (lysine demethylase 5D)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39Y897,566 - 943,813 (+)NCBI
GRCm38Y897,566 - 943,813 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblY897,788 - 956,786 (+)EnsemblGRCm38mm10GRCm38
MGSCv37Y234,231 - 280,254 (+)NCBIGRCm37mm9NCBIm37
MGSCv36Y234,231 - 280,254 (+)NCBImm8
CeleraY3,732,939 - 3,779,374 (+)NCBICelera
Cytogenetic MapYA1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Kdm5d
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1615943
Created: 2007-04-30
Species: Mus musculus
Last Modified: 2020-10-13
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.