Olfr117 (olfactory receptor 117) - Chinchilla Research Resource Database
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Gene: Olfr117 (olfactory receptor 117) Mus musculus
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Symbol: Olfr117
Name: olfactory receptor 117
CRRD ID: 1617268
Description: Predicted to have olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to localize to integral component of membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: GA_x6K02T2PSCP-2119438-2118485; MOR256-; MOR256-33; olfactory receptor MOR256-33
Orthologs:
Homo sapiens (human) : OR2G3 (olfactory receptor family 2 subfamily G member 3)  HGNC  Alliance
Rattus norvegicus (Norway rat) : LOC103690297 (putative olfactory receptor 2W6)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100981066 (olfactory receptor 2G3)
Sus scrofa (pig) : LOC100516421 (olfactory receptor 2G3)
Chlorocebus sabaeus (African green monkey) : LOC103230946 (olfactory receptor 2G3)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391737,970,269 - 37,971,222 (-)NCBI
GRCm381737,659,378 - 37,660,331 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1737,657,600 - 37,663,782 (-)EnsemblGRCm38mm10GRCm38
MGSCv371737,796,323 - 37,797,276 (-)NCBIGRCm37mm9NCBIm37
MGSCv361737,267,431 - 37,268,384 (-)NCBImm8
Celera1741,101,397 - 41,102,350 (-)NCBICelera
Cytogenetic Map17B1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:11802173   PMID:11875048   PMID:12477932   PMID:14506126   PMID:14611657   PMID:21873635  


Genomics

Comparative Map Data
Olfr117
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391737,970,269 - 37,971,222 (-)NCBI
GRCm381737,659,378 - 37,660,331 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1737,657,600 - 37,663,782 (-)EnsemblGRCm38mm10GRCm38
MGSCv371737,796,323 - 37,797,276 (-)NCBIGRCm37mm9NCBIm37
MGSCv361737,267,431 - 37,268,384 (-)NCBImm8
Celera1741,101,397 - 41,102,350 (-)NCBICelera
Cytogenetic Map17B1NCBI
OR2G3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1247,605,586 - 247,606,515 (+)EnsemblGRCh38hg38GRCh38
GRCh381247,605,586 - 247,606,515 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371247,768,888 - 247,769,817 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361245,835,511 - 245,836,440 (+)NCBINCBI36hg18NCBI36
Build 341244,094,928 - 244,095,858NCBI
Celera1221,067,685 - 221,068,614 (+)NCBI
Cytogenetic Map1q44NCBI
HuRef1218,163,051 - 218,163,980 (+)NCBIHuRef
CHM1_11249,041,244 - 249,042,173 (+)NCBICHM1_1
LOC103690297
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01744,947,425 - 44,948,449 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1744,947,494 - 44,948,432 (-)EnsemblRnor6.0rn6Rnor6.0
Celera1753,554,824 - 53,555,848 (+)NCBICelera
Cytogenetic Map17p11NCBI
LOC100981066
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11228,691,062 - 228,692,041 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1228,691,088 - 228,692,017 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01223,239,171 - 223,240,150 (+)NCBIMhudiblu_PPA_v0panPan3
LOC100516421
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl256,615,141 - 56,616,070 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1256,615,126 - 56,616,070 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2257,551,726 - 57,552,670 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103230946
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl2584,647,009 - 84,647,935 (+)Ensembl
ChlSab1.12584,646,097 - 84,649,002 (+)NCBI

Position Markers
UniSTS:485104  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381738,067,173 - 38,068,126UniSTSGRCm38
GRCm381737,659,378 - 37,660,331UniSTSGRCm38
MGSCv371738,204,118 - 38,205,071UniSTSGRCm37
MGSCv371737,796,323 - 37,797,276UniSTSGRCm37
Celera1741,498,262 - 41,499,215UniSTS
Cytogenetic Map17B1UniSTS
UniSTS:492773  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381737,659,305 - 37,660,370UniSTSGRCm38
MGSCv371737,796,250 - 37,797,315UniSTSGRCm37
Celera1741,101,324 - 41,102,389UniSTS
Cytogenetic Map17B1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
CRRD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17392461548559063Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined480447745359340Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17480447746158776Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17480447747574740Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined480447765330362Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17667496240674962Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17836594042366175Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17836594042366175Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined17986241186688972Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171065914544659245Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1098759739053168Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1166699745667145Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171177921045779210Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171206732483054339Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171223281346232813Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171242798746427987Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171390439847904522Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171484267848842786Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171484267848842786Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171484267848842786Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171484267848842786Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171660074750600869Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171660074750600869Mouse
1301505Tir1_mtrypanosome infection response 1 (mouse)Not determined171660074750600869Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171681096950811104Mouse
1302042Acsns3_mAngiostrongylus costaricensis nematode susceptibility 3 (mouse)Not determined171724323451243371Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171724323451243371Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171724323451243371Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171724323451243371Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171724323451243371Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171795643651959238Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171819938152202007Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171820316552205351Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171883413352834133Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172430185958301973Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172485760955405969Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172536594043665344Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172574029459740461Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172618203852604676Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172628636340794146Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172657408160574223Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172749681845311728Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172750432261504322Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172765914543574223Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172831148062311728Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined172982162963821740Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3072257564722705Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3076892947728778Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173290000053800000Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173495684169858931Mouse
10755514Amzn2_manatomical modifier of Zfp423 2 (mouse)173565926669659396Mouse
12904951Smmq2_msoleus muscle mass QTL 2 (mouse)173648271570482715Mouse
1301474Hcbip2_mhexachlorobenzene induced porphyria 2 (mouse)Not determined173748216445311728Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:107
Count of miRNA genes:106
Interacting mature miRNAs:107
Transcripts:ENSMUST00000073636
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000073636   ⟹   ENSMUSP00000073320
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1737,659,378 - 37,660,331 (-)Ensembl
RefSeq Acc Id: ENSMUST00000213638   ⟹   ENSMUSP00000149006
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1737,657,600 - 37,663,782 (-)Ensembl
RefSeq Acc Id: ENSMUST00000215414   ⟹   ENSMUSP00000150204
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1737,657,600 - 37,663,775 (-)Ensembl
RefSeq Acc Id: NM_207155   ⟹   NP_997038
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391737,970,269 - 37,971,222 (-)NCBI
GRCm381737,659,378 - 37,660,331 (-)ENTREZGENE
MGSCv371737,796,323 - 37,797,276 (-)RGD
Celera1741,101,397 - 41,102,350 (-)RGD
cM Map17 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_997038   ⟸   NM_207155
- UniProtKB: L7N1Z1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000073320   ⟸   ENSMUST00000073636
RefSeq Acc Id: ENSMUSP00000149006   ⟸   ENSMUST00000213638
RefSeq Acc Id: ENSMUSP00000150204   ⟸   ENSMUST00000215414
Protein Domains
G_PROTEIN_RECEP_F1_2


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2177500 AgrOrtholog
Ensembl Genes ENSMUSG00000095286 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000073320 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000149006 UniProtKB/TrEMBL
  ENSMUSP00000150204 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000073636 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000213638 UniProtKB/TrEMBL
  ENSMUST00000215414 UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report mmu:258263 UniProtKB/TrEMBL
MGD MGI:2177500 ENTREZGENE
NCBI Gene 258263 ENTREZGENE
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Olfr117 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
UniGene Mm.377399 ENTREZGENE
UniProt L7N1Z1 ENTREZGENE, UniProtKB/TrEMBL
  Q7TRJ7_MOUSE UniProtKB/TrEMBL