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Gene: Prdm9 (PR domain containing 9) Mus musculus
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Symbol: Prdm9
Name: PR domain containing 9
CRRD ID: 1623005
Description: Exhibits DNA binding activity; histone-lysine N-methyltransferase activity; and protein homodimerization activity. Involved in several processes, including histone lysine methylation; meiosis I; and positive regulation of nitrogen compound metabolic process. Localizes to chromatin and nucleus. Is expressed in embryo and head. Orthologous to human PRDM9 (PR/SET domain 9); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,2',4,4',5,5'-hexachlorobiphenyl; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: [histone H3]-lysine36 N-trimethyltransferase PRDM9; [histone H3]-lysine4 N-trimethyltransferase PRDM9; [histone H3]-lysine9 N-trimethyltransferase PRDM9; [histone H4]-lysine20 N-methyltransferase PRDM9; [histone H4]-N-methyl-L-lysine20 N-methyltransferase PRDM9; BC012016; Dsbc; Dsbc1; G1-419-29; histone H3 lysine-4 methyltransferase; histone-lysine N-methyltransferase PRDM9; hybrid sterility protein 1; meiosis-induced factor containing a PR/SET domain and zinc-finger motif; Meise; Meisetz; MGC21428; PR domain zinc finger protein 9; PR domain-containing protein 9; PR-domain zinc finger protein; PRDM9 isoform Hst1f; PRDM9-A isoform Hst1f; PRDM9-B; protein-lysine N-methyltransferase PRDM9; Rc; Rcr1; re; repro7; VPR domain containing 9
Orthologs:
Homo sapiens (human) : PRDM9 (PR/SET domain 9)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Prdm9 (PR/SET domain 9)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : PRDM9 (PR/SET domain 9)
Chlorocebus sabaeus (African green monkey) : PRDM9 (PR/SET domain 9)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391715,763,334 - 15,784,636 (-)NCBI
GRCm381715,543,072 - 15,564,374 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1715,543,079 - 15,564,354 (-)EnsemblGRCm38mm10GRCm38
MGSCv371715,680,043 - 15,700,287 (-)NCBIGRCm37mm9NCBIm37
MGSCv361715,257,958 - 15,269,069 (-)NCBImm8
Celera1716,328,380 - 16,348,750 (-)NCBICelera
Cytogenetic Map17A2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Prdm9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1623005
Created: 2007-05-02
Species: Mus musculus
Last Modified: 2020-10-13
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.