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Gene: Prdm9 (PR domain containing 9) Mus musculus
Symbol: Prdm9
Name: PR domain containing 9
CRRD ID: 1623005
Description: Exhibits DNA binding activity; histone-lysine N-methyltransferase activity; and protein homodimerization activity. Involved in several processes, including histone lysine methylation; meiosis I; and positive regulation of nitrogen compound metabolic process. Localizes to chromatin and nucleus. Is expressed in embryo and head. Orthologous to human PRDM9 (PR/SET domain 9); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,2',4,4',5,5'-hexachlorobiphenyl; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: [histone H3]-lysine36 N-trimethyltransferase PRDM9; [histone H3]-lysine4 N-trimethyltransferase PRDM9; [histone H3]-lysine9 N-trimethyltransferase PRDM9; [histone H4]-lysine20 N-methyltransferase PRDM9; [histone H4]-N-methyl-L-lysine20 N-methyltransferase PRDM9; BC012016; Dsbc; Dsbc1; G1-419-29; histone H3 lysine-4 methyltransferase; histone-lysine N-methyltransferase PRDM9; hybrid sterility protein 1; meiosis-induced factor containing a PR/SET domain and zinc-finger motif; Meise; Meisetz; MGC21428; PR domain zinc finger protein 9; PR domain-containing protein 9; PR-domain zinc finger protein; PRDM9 isoform Hst1f; PRDM9-A isoform Hst1f; PRDM9-B; protein-lysine N-methyltransferase PRDM9; Rc; Rcr1; re; repro7; VPR domain containing 9
Homo sapiens (human) : PRDM9 (PR/SET domain 9)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Prdm9 (PR/SET domain 9)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : PRDM9 (PR/SET domain 9)
Chlorocebus sabaeus (African green monkey) : PRDM9 (PR/SET domain 9)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm391715,763,334 - 15,784,636 (-)NCBI
GRCm381715,543,072 - 15,564,374 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1715,543,079 - 15,564,354 (-)EnsemblGRCm38mm10GRCm38
MGSCv371715,680,043 - 15,700,287 (-)NCBIGRCm37mm9NCBIm37
MGSCv361715,257,958 - 15,269,069 (-)NCBImm8
Celera1716,328,380 - 16,348,750 (-)NCBICelera
Cytogenetic Map17A2NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
QTLs in Region (GRCm38)
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Prdm9
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1623005
Created: 2007-05-02
Species: Mus musculus
Last Modified: 2020-10-13
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.