Gene: Apob (apolipoprotein B) Rattus norvegicus
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Symbol: Apob
Name: apolipoprotein B
Description: Predicted to have several functions, including anion binding activity, cholesterol transporter activity, and lipase binding activity; involved in several processes, including cellular response to prostaglandin stimulus, cellular response to tumor necrosis factor, and response to carbohydrate; localizes to several cellular components, including the high-density lipoprotein particle, intracellular membrane-bounded organelle, and low-density lipoprotein particle; biomarker of fatty liver disease and nephrotic syndrome; orthologous to human APOB (apolipoprotein B); PARTICIPATES IN altered lipoprotein metabolic pathway; forkhead class A signaling pathway; lipoprotein metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: Aa1064; Ac1-060; Apo B-100; ApoB-100; ApoB-48; apolipoprotein B (including Ag(x) antigen); apolipoprotein B PI; apolipoprotein B-100; apolipoprotein B-48
Orthologs:
Homo sapiens (human) : APOB (apolipoprotein B)  HGNC  Alliance
Mus musculus (house mouse) : Apob (apolipoprotein B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Apob (apolipoprotein B)
Pan paniscus (bonobo/pygmy chimpanzee) : APOB (apolipoprotein B)
Canis lupus familiaris (dog) : APOB (apolipoprotein B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Apob (apolipoprotein B)
Sus scrofa (pig) : APOB (apolipoprotein B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0633,176,826 - 33,216,381 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0642,956,372 - 42,995,922 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4631,508,060 - 31,548,083 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1631,546,139 - 31,550,758 (+)NCBI
Celera630,299,724 - 30,339,330 (+)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Apob
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2129
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.