Gene: Apoa4 (apolipoprotein A4) Rattus norvegicus
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Symbol: Apoa4
Name: apolipoprotein A4
Description: Predicted to have several functions, including antioxidant activity, cation binding activity, and cholesterol binding activity; involved in peripheral nervous system axon regeneration and response to triglyceride; localizes to the chylomicron and synapse; predicted to colocalize with the cell surface; biomarker of major depressive disorder; orthologous to human APOA4 (apolipoprotein A4); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; INTERACTS WITH 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate; 1-nitropropane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Acl; Apo-AIV; ApoA-IV; apoAIV; Apoc4; apolipoprotein A-IV; apolipoprotein C-IV; apolipoprotein CIV
Orthologs:
Homo sapiens (human) : APOA4 (apolipoprotein A4)  HGNC  Alliance
Mus musculus (house mouse) : Apoa4 (apolipoprotein A-IV)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Apoa4 (apolipoprotein A4)
Pan paniscus (bonobo/pygmy chimpanzee) : APOA4 (apolipoprotein A4)
Canis lupus familiaris (dog) : APOA4 (apolipoprotein A4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Apoa4 (apolipoprotein A4)
Sus scrofa (pig) : APOA4 (apolipoprotein A4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0850,536,983 - 50,539,371 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0849,163,055 - 49,165,333 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4849,233,142 - 49,233,431 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1849,245,005 - 49,245,297 (+)NCBI
Celera846,121,074 - 46,123,455 (+)NCBICelera
Cytogenetic Map8q22NCBI
RH 3.4 Map8473.3RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Apoa4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2132
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.