Gene: Capn3 (calpain 3) Rattus norvegicus
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Symbol: Capn3
Name: calpain 3
Description: Exhibits several functions, including calcium-dependent cysteine-type endopeptidase activity, enzyme binding activity, and signaling receptor binding activity; involved in several processes, including response to calcium ion, response to drug, and response to muscle activity; localizes to the T-tubule, Z disc, and nucleus; biomarker of hepatocellular carcinoma; orthologous to human CAPN3 (calpain 3); INTERACTS WITH (RS)-amphetamine; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: calcium-activated neutral proteinase 3; calpain L3; calpain p94; calpain-3; CANP 3; Lp82; Lp84; Lp85; muscle-specific calcium-activated neutral protease 3; p94
Orthologs:
Homo sapiens (human) : CAPN3 (calpain 3)  HGNC  Alliance
Mus musculus (house mouse) : Capn3 (calpain 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Capn3 (calpain 3)
Pan paniscus (bonobo/pygmy chimpanzee) : CAPN3 (calpain 3)
Canis lupus familiaris (dog) : CAPN3 (calpain 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Capn3 (calpain 3)
Sus scrofa (pig) : CAPN3 (calpain 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03112,227,486 - 112,278,408 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03118,776,357 - 118,825,812 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43106,946,878 - 106,998,274 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13106,843,308 - 106,894,702 (+)NCBI
Celera3106,315,875 - 106,366,640 (+)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Capn3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2269
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.