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Gene: Jmjd7 (jumonji domain containing 7) Rattus norvegicus
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Symbol: Jmjd7
Name: jumonji domain containing 7
Description: Predicted to have several functions, including 2-oxoglutarate-dependent dioxygenase activity; methylated histone binding activity; and peptidase activity, acting on L-amino acid peptides. Predicted to be involved in protein hydroxylation. Predicted to localize to the cytoplasm and nucleus. Orthologous to human JMJD7 (jumonji domain containing 7); INTERACTS WITH amphetamine; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC100137086; jmjC domain-containing protein 7; LOC100137086
Orthologs:
Homo sapiens (human) : JMJD7 (jumonji domain containing 7)  HGNC  Alliance
Mus musculus (house mouse) : Jmjd7 (jumonji domain containing 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Jmjd7 (jumonji domain containing 7)
Canis lupus familiaris (dog) : JMJD7 (jumonji domain containing 7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Jmjd7 (jumonji domain containing 7)
Sus scrofa (pig) : JMJD7 (jumonji domain containing 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03111,818,150 - 111,824,211 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3111,818,150 - 111,824,211 (+)Ensembl
Rnor_5.03118,366,787 - 118,372,848 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43106,533,143 - 106,539,204 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3105,907,972 - 105,914,033 (+)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Jmjd7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2290039
Created: 2008-02-22
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.