Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Jmjd7 (jumonji domain containing 7) Rattus norvegicus
Analyze
Symbol: Jmjd7
Name: jumonji domain containing 7
CRRD ID: 2290039
Description: Predicted to have several functions, including 2-oxoglutarate-dependent dioxygenase activity; methylated histone binding activity; and peptidase activity. Predicted to be involved in protein hydroxylation. Predicted to localize to cytoplasm and nucleus. Orthologous to human JMJD7 (jumonji domain containing 7); INTERACTS WITH amphetamine; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC100137086; jmjC domain-containing protein 7; LOC100137086
Orthologs:
Homo sapiens (human) : JMJD7 (jumonji domain containing 7)  HGNC  Alliance
Mus musculus (house mouse) : Jmjd7 (jumonji domain containing 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Jmjd7 (jumonji domain containing 7)
Canis lupus familiaris (dog) : JMJD7 (jumonji domain containing 7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Jmjd7 (jumonji domain containing 7)
Sus scrofa (pig) : JMJD7 (jumonji domain containing 7)
Chlorocebus sabaeus (African green monkey) : JMJD7 (jumonji domain containing 7)
Heterocephalus glaber (naked mole-rat) : Jmjd7 (jumonji domain containing 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03111,818,150 - 111,824,211 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3111,818,150 - 111,824,211 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03118,366,787 - 118,372,848 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43106,533,143 - 106,539,204 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3105,907,972 - 105,914,033 (+)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Jmjd7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2290039
Created: 2008-02-22
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.