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Gene: Kdm5d (lysine demethylase 5D) Rattus norvegicus
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Symbol: Kdm5d
Name: lysine demethylase 5D
Description: Predicted to have androgen receptor binding activity and histone demethylase activity (H3-trimethyl-K4 specific). Predicted to be involved in T cell antigen processing and presentation; chromatin organization; and regulation of androgen receptor signaling pathway. Predicted to localize to the fibrillar center and histone methyltransferase complex. Orthologous to human KDM5D (lysine demethylase 5D); INTERACTS WITH atrazine; bisphenol A; tetrachloromethane.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Jarid1d; lysine (K)-specific demethylase 5D; lysine-specific demethylase 5D
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0Y501,058 - 589,267 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblY505,996 - 589,267 (+)Ensembl
Cytogenetic MapYq11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Kdm5d
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2314436
Created: 2009-11-13
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.