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Gene: Mir196a (microRNA 196a) Rattus norvegicus
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Symbol: Mir196a
Name: microRNA 196a
Description: Predicted to be involved in several processes, including cellular response to forskolin; cellular response to leukemia inhibitory factor; and mRNA cleavage involved in gene silencing by miRNA. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Orthologous to human MIR196A2 (microRNA 196a-2); INTERACTS WITH aflatoxin B1; atrazine; arsenite(3-) (ortholog).
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: microRNA mir-196a; rno-mir-196a
Orthologs:
Homo sapiens (human) : MIR196A2 (microRNA 196a-2)  HGNC  Alliance
Mus musculus (house mouse) : Mir196a-2 (microRNA 196a-2)  MGI
Canis lupus familiaris (dog) : MIR196A-2 (microRNA mir-196a-2)
Sus scrofa (pig) : MIR196A-2 (microRNA mir-196a-2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07144,584,235 - 144,584,344 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7144,584,235 - 144,584,344 (+)Ensembl
Rnor_5.07142,375,592 - 142,375,701 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47141,736,759 - 141,736,868 (+)NCBIRGSC3.4rn4RGSC3.4
Celera7130,536,584 - 130,536,693 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Mir196a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2314888
Created: 2009-12-04
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.