Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: LOC100364500 (RT1 class I, locus CE11-like) Rattus norvegicus
Symbol: LOC100364500
Name: RT1 class I, locus CE11-like
Description: Predicted to have several functions, including T cell receptor binding activity; beta-2-microglobulin binding activity; and peptide antigen binding activity. Predicted to be involved in several processes, including positive regulation of T cell activation; regulation of lymphocyte mediated immunity; and response to bacterium. Predicted to localize to several cellular components, including the Golgi medial cisterna; MHC class I protein complex; and endoplasmic reticulum. Human ortholog(s) of this gene implicated in several diseases, including Behcet's disease; asthma (multiple); bone inflammation disease (multiple); eye disease (multiple); and inner ear disease (multiple). Orthologous to several human genes including HLA-A (major histocompatibility complex, class I, A); HLA-B (major histocompatibility complex, class I, B); and HLA-E (major histocompatibility complex, class I, E); INTERACTS WITH 17beta-estradiol (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 2-(2,6-dioxopiperidin-3-yl)-1H-isoindole-1,3(2H)-dione (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: class I histocompatibility antigen, Non-RT1.A alpha-1 chain; RT1 class I histocompatibility antigen, AA alpha chain
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0202,704,153 - 2,707,111 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0204,805,474 - 4,808,452 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
QTLs in Region (Rnor_6.0)


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on LOC100364500
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2320860
Created: 2010-05-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.