Gene: Prdm16 (PR/SET domain 16) Rattus norvegicus
Symbol: Prdm16
Name: PR/SET domain 16
Description: Predicted to have several functions, including SMAD binding activity, activating transcription factor binding activity, and sequence-specific DNA binding activity; predicted to be involved in several processes, including brown fat cell differentiation, negative regulation of granulocyte differentiation, and regulation of cellular biosynthetic process; predicted to localize to several cellular components, including the aggresome, cytosol, and nucleoplasm; orthologous to human PRDM16 (PR/SET domain 16); PARTICIPATES IN histone modification pathway; INTERACTS WITH 1,1-dichloroethene (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 2,4-dinitrophenol (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100366024; PR domain 16; PR domain containing 16; PR domain containing 16-like; PR domain zinc finger protein 16
Homo sapiens (human) : PRDM16 (PR/SET domain 16)  HGNC  Alliance
Mus musculus (house mouse) : Prdm16 (PR domain containing 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prdm16 (PR/SET domain 16)
Pan paniscus (bonobo/pygmy chimpanzee) : PRDM16 (PR/SET domain 16)
Canis lupus familiaris (dog) : PRDM16 (PR/SET domain 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prdm16 (PR/SET domain 16)
Sus scrofa (pig) : PRDM16 (PR/SET domain 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.05171,662,277 - 171,711,561 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05175,133,484 - 175,180,206 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera5163,089,927 - 163,303,567 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
More on Prdm16
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2324431
Created: 2010-05-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.