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Gene: Hapln1 (hyaluronan and proteoglycan link protein 1) Rattus norvegicus
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Symbol: Hapln1
Name: hyaluronan and proteoglycan link protein 1
Description: Predicted to have hyaluronic acid binding activity and structural molecule activity. Predicted to be involved in central nervous system development and skeletal system development. Predicted to localize to the extracellular matrix and synapse. Orthologous to human HAPLN1 (hyaluronan and proteoglycan link protein 1); INTERACTS WITH 1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine; 2-amino-2-deoxy-D-glucopyranose; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cartilage link protein 1; cartilage-link protein; cartilage-linking protein 1; Crtl1; LP; MGC156657; proteoglycan link protein
Orthologs:
Homo sapiens (human) : HAPLN1 (hyaluronan and proteoglycan link protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Hapln1 (hyaluronan and proteoglycan link protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hapln1 (hyaluronan and proteoglycan link protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : HAPLN1 (hyaluronan and proteoglycan link protein 1)
Canis lupus familiaris (dog) : HAPLN1 (hyaluronan and proteoglycan link protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hapln1 (hyaluronan and proteoglycan link protein 1)
Sus scrofa (pig) : HAPLN1 (hyaluronan and proteoglycan link protein 1)
Chlorocebus sabaeus (African green monkey) : HAPLN1 (hyaluronan and proteoglycan link protein 1)
Heterocephalus glaber (naked mole-rat) : Hapln1 (hyaluronan and proteoglycan link protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0218,354,542 - 18,419,077 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl218,354,542 - 18,419,071 (+)Ensembl
Rnor_5.0218,229,924 - 18,294,459 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4219,576,064 - 19,638,106 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1219,534,388 - 19,557,456 (+)NCBI
Celera216,774,532 - 16,836,586 (+)NCBICelera
Cytogenetic Map2q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Hapln1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2412
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.