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Gene: H1f6 (H1.6 linker histone, cluster member) Rattus norvegicus
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Symbol: H1f6
Name: H1.6 linker histone, cluster member
Description: Predicted to have double-stranded DNA binding activity and nucleosomal DNA binding activity. Involved in spermatogenesis. Predicted to localize to the condensed nuclear chromosome and nuclear euchromatin. Orthologous to human HIST1H1T (histone cluster 1 H1 family member t); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: H1 histone family member 3; H1 histone family member T (testis-specific); H1 histone family, member 3; H1 histone family, member T (testis-specific); H1.3; H1D; H1f3; H1ft; H1s-4; H1t; Hist1h1t; histone 1 a family 3; histone 1 family 3; histone 1, family 3; histone 1, H1t; histone 1t; histone cluster 1 H1 family member t; histone cluster 1, H1t; histone H1t; Testis-specific histone 1; Testis-specific histone 1 probably same as Hh1tts; testis-specific histone 1, probably same as Hh1tts
Orthologs:
Homo sapiens (human) : H1-6 (H1.6 linker histone, cluster member)  HGNC  Alliance
Mus musculus (house mouse) : H1f6 (H1.6 linker histone, cluster member)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : H1-6 (H1.6 linker histone, cluster member)
Canis lupus familiaris (dog) : H1-6 (H1.6 linker histone, cluster member)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : H1-6 (H1.6 linker histone, cluster member)
Sus scrofa (pig) : H1-6 (H1.6 linker histone, cluster member)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01743,675,190 - 43,675,934 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01745,513,826 - 45,531,456 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41748,463,316 - 48,464,060 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11748,466,156 - 48,466,901 (+)NCBI
Celera1741,059,775 - 41,060,519 (-)NCBICelera
Cytogenetic Map17p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on H1f6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2778
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-09-24
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.