Gene: Hcrt (hypocretin neuropeptide precursor) Rattus norvegicus
Analyze
Symbol: Hcrt
Name: hypocretin neuropeptide precursor
Description: Exhibits neuropeptide hormone activity, type 1 hypocretin receptor binding activity, and type 2 hypocretin receptor binding activity; involved in several processes, including G protein-coupled receptor signaling pathway, regulation of ion transport, and regulation of neurological system process; localizes to the secretory granule; biomarker of hyperglycemia and obesity; orthologous to human HCRT (hypocretin neuropeptide precursor); PARTICIPATES IN orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 2; orexin/hypocretin signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypocretin; hypocretin (orexin) neuropeptide; hypocretin (orexin) neuropeptide precursor; orexin; orexin-A
Orthologs:
Homo sapiens (human) : HCRT (hypocretin neuropeptide precursor)  HGNC  Alliance
Mus musculus (house mouse) : Hcrt (hypocretin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hcrt (hypocretin neuropeptide precursor)
Pan paniscus (bonobo/pygmy chimpanzee) : HCRT (hypocretin neuropeptide precursor)
Canis lupus familiaris (dog) : HCRT (hypocretin neuropeptide precursor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hcrt (hypocretin neuropeptide precursor)
Sus scrofa (pig) : HCRT (hypocretin neuropeptide precursor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01088,669,216 - 88,670,430 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01088,463,386 - 88,464,600 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,699,633 - 89,700,847 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11089,714,002 - 89,715,214 (-)NCBI
Celera1084,405,435 - 84,406,649 (-)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Hcrt
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 2786
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-05-14
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.