Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Odf1 (outer dense fiber of sperm tails 1) Rattus norvegicus
Analyze
Symbol: Odf1
Name: outer dense fiber of sperm tails 1
Description: Exhibits protein domain specific binding activity. Predicted to be involved in cell differentiation; multicellular organism development; and spermatogenesis. Predicted to localize to the outer dense fiber. Orthologous to human ODF1 (outer dense fiber of sperm tails 1); INTERACTS WITH ammonium chloride; bisphenol A; lead nitrate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: outer dense fiber protein 1; RTS 5/1; Sperm outer dense fiber major protein 1
Orthologs:
Homo sapiens (human) : ODF1 (outer dense fiber of sperm tails 1)  HGNC  Alliance
Mus musculus (house mouse) : Odf1 (outer dense fiber of sperm tails 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Odf1 (outer dense fiber of sperm tails 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ODF1 (outer dense fiber of sperm tails 1)
Canis lupus familiaris (dog) : ODF1 (outer dense fiber of sperm tails 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Odf1 (outer dense fiber of sperm tails 1)
Sus scrofa (pig) : ODF1 (outer dense fiber of sperm tails 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0777,066,580 - 77,074,712 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0777,172,716 - 77,180,530 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4773,736,778 - 73,744,536 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1773,757,489 - 73,765,265 (+)NCBI
Celera766,445,193 - 66,452,953 (+)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Odf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3228
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.