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Gene: Pacsin1 (protein kinase C and casein kinase substrate in neurons 1) Rattus norvegicus
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Symbol: Pacsin1
Name: protein kinase C and casein kinase substrate in neurons 1
Description: Exhibits phospholipid binding activity. Involved in several processes, including generation of neurons; plasma membrane tubulation; and regulation of postsynaptic neurotransmitter receptor internalization. Localizes to several cellular components, including glutamatergic synapse; perinuclear region of cytoplasm; and postsynaptic density membrane. Orthologous to human PACSIN1 (protein kinase C and casein kinase substrate in neurons 1); INTERACTS WITH 1-naphthyl isothiocyanate; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: dynamin PRD-interacting protein; dynamin proline-rich domain-interacting protein; protein kinase C and casein kinase substrate in neurons protein 1; sdpI; synaptic, dynamin-associated protein I; syndapin 1; syndapin I; syndapin-1; syndapin-I
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0207,241,248 - 7,286,702 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl207,279,820 - 7,286,586 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0209,443,609 - 9,489,048 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4205,875,450 - 5,921,738 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1205,875,676 - 5,921,965 (+)NCBI
Celera207,282,963 - 7,327,615 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pacsin1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3247
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.