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Gene: Padi4 (peptidyl arginine deiminase 4) Rattus norvegicus
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Symbol: Padi4
Name: peptidyl arginine deiminase 4
Description: Exhibits protein-arginine deiminase activity. Involved in protein citrullination. Predicted to localize to the cytoplasm; nucleus; and protein-containing complex. Human ortholog(s) of this gene implicated in rheumatoid arthritis. Orthologous to human PADI4 (peptidyl arginine deiminase 4); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol; 3,3',5-triiodo-L-thyronine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: PAD-R4; Pdi4; peptidyl arginine deiminase type IV; peptidyl arginine deiminase, type 4; peptidyl arginine deiminase, type IV; peptidylarginine deiminase IV; peptidylarginine deiminase type alpha; protein-arginine deiminase type IV; protein-arginine deiminase type-4
Orthologs:
Homo sapiens (human) : PADI4 (peptidyl arginine deiminase 4)  HGNC  Alliance
Mus musculus (house mouse) : Padi4 (peptidyl arginine deiminase, type IV)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Padi4 (peptidyl arginine deiminase 4)
Pan paniscus (bonobo/pygmy chimpanzee) : PADI4 (peptidyl arginine deiminase 4)
Canis lupus familiaris (dog) : PADI4 (peptidyl arginine deiminase 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Padi4 (peptidyl arginine deiminase 4)
Sus scrofa (pig) : PADI4 (peptidyl arginine deiminase 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05159,260,675 - 159,293,906 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5159,260,675 - 159,293,673 (-)Ensembl
Rnor_5.05162,967,383 - 163,001,294 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45159,580,718 - 159,614,628 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15159,590,905 - 159,624,816 (-)NCBI
Celera5151,402,208 - 151,435,173 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Padi4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 3290
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.